RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SLC7A9P82251 487 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 ORC1Q13415 861 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 PDGFRLQ15198 375 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 EML3Q32P44 896 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 DGKKQ5KSL6 1271 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 ACOT1Q86TX2 421 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 WHAMMQ8TF30 809 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 OSCP1Q8WVF1 389 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 EZH1Q92800 747 aaPredicted RBP18.52■□□□□ 0.56
SMG6-214ENST00000573827 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.56
SMG6-214ENST00000573827 EEF2KMTQ96G04 330 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 SMOQ99835 787 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 TRPM5Q9NZQ8 1165 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 SPTBN2O15020 2390 aa18.52■□□□□ 0.55
SMG6-214ENST00000573827 BEST1O76090 585 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 ZDHHC11BP0C7U3 371 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 RPL13P26373 211 aaKnown RBP18.51■□□□□ 0.55
SMG6-214ENST00000573827 GJA4P35212 333 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 LRRC32Q14392 662 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 GAB4Q2WGN9 574 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
SMG6-214ENST00000573827 PKN3Q6P5Z2 889 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 UNC93AQ86WB7 457 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 NUP93Q8N1F7 819 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 SCAMP5Q8TAC9 235 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 SEMA4DQ92854 862 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 TNIP3Q96KP6 325 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 TIGD1Q96MW7 591 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 FAM126AQ9BYI3 521 aaPredicted RBP18.51■□□□□ 0.55
SMG6-214ENST00000573827 EPC1Q9H2F5 836 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 LINC00597Q9H2U6 94 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 ECT2Q9H8V3 914 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 CSNK1G1Q9HCP0 422 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 PCDHA5Q9Y5H7 936 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 WNT6Q9Y6F9 365 aa18.51■□□□□ 0.55
SMG6-214ENST00000573827 SDK1Q7Z5N4 2213 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 ATG2BQ96BY7 2078 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 CCDC130P13994 396 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 GTF2H1P32780 548 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 PIK3CAP42336 1068 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 PPP3CCP48454 512 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 PGFP49763 221 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 CCR3P51677 355 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 DMWDQ09019 674 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 SNX30Q5VWJ9 437 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 SYNPOQ8N3V7 929 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 C12orf29Q8N999 325 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 SLC2A14Q8TDB8 520 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 ZFRQ96KR1 1074 aaKnown RBP18.5■□□□□ 0.55
SMG6-214ENST00000573827 TMEM8AQ9HCN3 771 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMG6-214ENST00000573827 DUS2Q9NX74 493 aaKnown RBP18.5■□□□□ 0.55
SMG6-214ENST00000573827 EHD2Q9NZN4 543 aa18.5■□□□□ 0.55
SMG6-214ENST00000573827 LEFTY2O00292 366 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
SMG6-214ENST00000573827 P4HA1P13674 534 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 CXCL12P48061 93 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 SLC5A3P53794 718 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 ELOA2Q8IYF1 753 aaPredicted RBP18.49■□□□□ 0.55
SMG6-214ENST00000573827 KIAA1958Q8N8K9 716 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 OVCA2Q8WZ82 227 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 SMARCD1Q96GM5 515 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 NIF3L1Q9GZT8 377 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 CYP3A43Q9HB55 503 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
SMG6-214ENST00000573827 KRT82Q9NSB4 513 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 RMND1Q9NWS8 449 aa18.49■□□□□ 0.55
SMG6-214ENST00000573827 HHLA1C9JL84 531 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 CILPO75339 1184 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 AP1G2O75843 785 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 RTN3O95197 1032 aaPredicted RBP18.48■□□□□ 0.55
SMG6-214ENST00000573827 KRT13P13646 458 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 BMP6P22004 513 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 YWHAQP27348 245 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 HOXA6P31267 233 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 PDE6CP51160 858 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 GALK1P51570 392 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 KRT39Q6A163 491 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 ANKRD40Q6AI12 368 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 CC2D1AQ6P1N0 951 aaPredicted RBP18.48■□□□□ 0.55
SMG6-214ENST00000573827 DCLK2Q8N568 766 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 ATRIPQ8WXE1 791 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
SMG6-214ENST00000573827 FAM49BQ9NUQ9 324 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 LAMA1P25391 3075 aa18.48■□□□□ 0.55
SMG6-214ENST00000573827 EGFP01133 1207 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 CHRM1P11229 460 aaPredicted RBP18.47■□□□□ 0.55
SMG6-214ENST00000573827 CD44P16070 742 aaKnown RBP18.47■□□□□ 0.55
SMG6-214ENST00000573827 CLEC20AQ6ZU45 233 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 GPRIN1Q7Z2K8 1008 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 CPA6Q8N4T0 437 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 ATP2A3Q93084 1043 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 SLITRK1Q96PX8 696 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 COMMD8Q9NX08 183 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 CPQQ9Y646 472 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 ATP8B3O60423 1300 aa18.47■□□□□ 0.55
SMG6-214ENST00000573827 TRIM49BA6NDI0 452 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms