RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KRT36O76013 467 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 EGFRP00533 1210 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 CHRM1P11229 460 aaPredicted RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 SERPINB4P48594 390 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 KLC1Q07866 573 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 KRT72Q14CN4 511 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 STXBP2Q15833 593 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 SNX30Q5VWJ9 437 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 TTC7BQ86TV6 843 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 ZNF333Q96JL9 665 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 IQCGQ9H095 443 aaKnown RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 NRBP2Q9NSY0 501 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.32■□□□□ 0.2
NUP88-207ENST00000573584 POLIQ9UNA4 740 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 OGTO15294 1046 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 MED7O43513 233 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 RNF8O76064 485 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 STIP1P31948 543 aaKnown RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 HMGCS2P54868 508 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 IRX1P78414 480 aaPredicted RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 FAM182AQ5T1J6 154 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 XYLT1Q86Y38 959 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 OXNAD1Q96HP4 312 aaPredicted RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 FAM237BA0A1B0GVD1 139 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 PPP1R12AO14974 1030 aaPredicted RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 RXRBP28702 533 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 EFNA5P52803 228 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 ROR1Q01973 937 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 FSTL1Q12841 308 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 NPNTQ6UXI9 565 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 ACO2Q99798 780 aaKnown RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 CPSF3Q9UKF6 684 aaKnown RBP16.32■□□□□ 0.2
NUP88-207ENST00000573584 FCHO1O14526 889 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 COPEO14579 308 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 CAPN9O14815 690 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ERBB2P04626 1255 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ORC1Q13415 861 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 TARBP2Q15633 366 aaKnown RBP16.31■□□□□ 0.2
NUP88-207ENST00000573584 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 CTAGE3PQ8IX95 158 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 CFAP61Q8NHU2 1237 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 FAF2Q96CS3 445 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 RSAD1Q9HA92 442 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ARMCX1Q9P291 453 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.31■□□□□ 0.2
NUP88-207ENST00000573584 FAM155BO75949 473 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 TRUB2O95900 331 aaKnown RBP16.31■□□□□ 0.2
NUP88-207ENST00000573584 CDH8P55286 799 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 OSTNP61366 133 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 SURF1Q15526 300 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 PRPF39Q86UA1 669 aaKnown RBP16.31■□□□□ 0.2
NUP88-207ENST00000573584 SLC26A11Q86WA9 606 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 WDR60Q8WVS4 1066 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 NRG4Q8WWG1 115 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 STMN2Q93045 179 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 CFAP36Q96G28 342 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 SRPK1Q96SB4 655 aaKnown RBP16.31■□□□□ 0.2
NUP88-207ENST00000573584 NMUR2Q9GZQ4 415 aa16.31■□□□□ 0.2
NUP88-207ENST00000573584 ABLIM1O14639 778 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 SPAG6O75602 509 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 PSMG1O95456 288 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 TNNC2P02585 160 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 KRT19P08727 400 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 HOXC6P09630 235 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 SLC34A1Q06495 639 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 KCNJ11Q14654 390 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 TMEM154Q6P9G4 183 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 CDHR3Q6ZTQ4 885 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
NUP88-207ENST00000573584 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 SCG3Q8WXD2 468 aaKnown RBP16.3■□□□□ 0.2
NUP88-207ENST00000573584 PCYT2Q99447 389 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 MMADHCQ9H3L0 296 aaPredicted RBP16.3■□□□□ 0.2
NUP88-207ENST00000573584 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 TRIM49D1C9J1S8 452 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 RARBP10826 455 aa16.3■□□□□ 0.2
NUP88-207ENST00000573584 TTC39BQ5VTQ0 682 aaPredicted RBP16.3■□□□□ 0.2
NUP88-207ENST00000573584 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
NUP88-207ENST00000573584 E5RJQ4 531 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 H7C0C1 242 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 KLF11O14901 512 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 TBX10O75333 385 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 IL1BP01584 269 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 PRKCBP05771 671 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 ICAM3P32942 547 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms