RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RHOBTB3O94955 611 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 ANXA13P27216 316 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 OPRD1P41143 372 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 SYKP43405 635 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 ATXN1P54253 815 aaKnown RBP19.26■□□□□ 0.67
CHD3-214ENST00000572579 PUM1Q14671 1186 aaKnown RBP eCLIP19.26■□□□□ 0.67
CHD3-214ENST00000572579 LAIR1Q6GTX8 287 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 ACOT1Q86TX2 421 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 ADGRG2Q8IZP9 1017 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 CPA6Q8N4T0 437 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 TMC2Q8TDI7 906 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 WBP2Q969T9 261 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 ZFRQ96KR1 1074 aaKnown RBP19.26■□□□□ 0.67
CHD3-214ENST00000572579 ELOVL4Q9GZR5 314 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 APOBEC3GQ9HC16 384 aaKnown RBP19.26■□□□□ 0.67
CHD3-214ENST00000572579 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.673e-8■■■■■ 104.9
CHD3-214ENST00000572579 SMPD4Q9NXE4 827 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 CHORDC1Q9UHD1 332 aaPredicted RBP19.26■□□□□ 0.67
CHD3-214ENST00000572579 TRAF3IP3Q9Y228 551 aa19.26■□□□□ 0.67
CHD3-214ENST00000572579 SDK1Q7Z5N4 2213 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 RETP07949 1114 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 PFKLP17858 780 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 DRD1P21728 446 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 ASPAP45381 313 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 IFNAR2P48551 515 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 AP3M2P53677 418 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 KRT85P78386 507 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 PPP3CAQ08209 521 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 ZNF667Q5HYK9 610 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 DGLUCYQ7Z3D6 616 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 FAM35AQ86V20 835 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 NUP93Q8N1F7 819 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 FAM160A2Q8N612 972 aaPredicted RBP19.25■□□□□ 0.67
CHD3-214ENST00000572579 ATP2A3Q93084 1043 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 TWNKQ96RR1 684 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 SMOQ99835 787 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 CPQQ9Y646 472 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.25■□□□□ 0.67
CHD3-214ENST00000572579 GREB1Q4ZG55 1949 aa19.25■□□□□ 0.67
CHD3-214ENST00000572579 ANAPC1Q9H1A4 1944 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 SPTBN2O15020 2390 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 K7EQS6 105 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 ABL1P00519 1130 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 ASS1P00966 412 aaKnown RBP19.24■□□□□ 0.67
CHD3-214ENST00000572579 MYL1P05976 194 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 CCDC130P13994 396 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 YWHAQP27348 245 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 CNR2P34972 360 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 SLC6A11P48066 632 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 NDST1P52848 882 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 MCCD1P59942 119 aaPredicted RBP19.24■□□□□ 0.67
CHD3-214ENST00000572579 IFRD2Q12894 506 aaPredicted RBP19.24■□□□□ 0.67
CHD3-214ENST00000572579 SGSM1Q2NKQ1 1148 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 CEP135Q66GS9 1140 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 KRBA2Q6ZNG9 492 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 FILIP1Q7Z7B0 1213 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 CRYBG2Q8N1P7 616 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 C12orf29Q8N999 325 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 RPLP0P6Q8NHW5 317 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 CD101Q93033 1021 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 GMEB2Q9UKD1 530 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 USP18Q9UMW8 372 aa19.24■□□□□ 0.67
CHD3-214ENST00000572579 PTPRDP23468 1912 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 ATG2BQ96BY7 2078 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 A0A1W2PQ27 194 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 A0A1W2PQ64 194 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 A0A1W2PQD8 194 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 FAM92AA1XBS5 289 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 IKBKBO14920 756 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 COCHO43405 550 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 CYP17A1P05093 508 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 ZDHHC11BP0C7U3 371 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 TRIM49P0CI25 452 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 TRIM49CP0CI26 452 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 PPP3CCP48454 512 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 ZCWPW2Q504Y3 356 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 SNX30Q5VWJ9 437 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 RHBDF2Q6PJF5 856 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 C12orf40Q86WS4 652 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 GPR161Q8N6U8 529 aaKnown RBP19.23■□□□□ 0.67
CHD3-214ENST00000572579 TAS1R2Q8TE23 839 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 WHAMMQ8TF30 809 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 HHIPQ96QV1 700 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 CFAP97Q9P2B7 532 aa19.23■□□□□ 0.67
CHD3-214ENST00000572579 ZNF202O95125 648 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 GCLMP48507 274 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 VAMP7P51809 220 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 SLC5A3P53794 718 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 AMPD2Q01433 879 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 DHCR24Q15392 516 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 NFIL3Q16649 462 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 KBTBD6Q86V97 674 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 SMYD4Q8IYR2 804 aaPredicted RBP19.22■□□□□ 0.67
CHD3-214ENST00000572579 SLC2A14Q8TDB8 520 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 SECISBP2LQ93073 1101 aaKnown RBP19.22■□□□□ 0.67
CHD3-214ENST00000572579 FBXO32Q969P5 355 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 CCSER2Q9H7U1 834 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms