RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 KNL1Q8NG31 2342 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ANTXRLA6NF34 631 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 SLC26A4O43511 780 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ADAM23O75077 832 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ADH5P11766 374 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 GNSP15586 552 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ACAT1P24752 427 aaKnown RBP12.13□□□□□ -0.47
CHMP6-202ENST00000571457 SLC6A11P48066 632 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ZNF131P52739 623 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 SLC7A9P82251 487 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 GTF2BQ00403 316 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 POSTNQ15063 836 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
CHMP6-202ENST00000571457 PLEKHG6Q3KR16 790 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 RHBDF2Q6PJF5 856 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 GPBP1Q86WP2 473 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHMP6-202ENST00000571457 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
CHMP6-202ENST00000571457 ZDHHC5Q9C0B5 715 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
CHMP6-202ENST00000571457 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 TBC1D14Q9P2M4 693 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 KNTC1P50748 2209 aa12.13□□□□□ -0.47
CHMP6-202ENST00000571457 TBC1D3BA6NDS4 549 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ANKRD63C9JTQ0 380 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TBCAO75347 108 aaKnown RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 GJB3O75712 270 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ANXA13P27216 316 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ZXDBP98169 803 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 KDSRQ06136 332 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 MESP2Q0VG99 397 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TMEM119Q4V9L6 283 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 DENND5BQ6ZUT9 1274 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 GLRX5Q86SX6 157 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 SFTPA1Q8IWL2 248 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 RGL4Q8IZJ4 473 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 DEFB119Q8N690 84 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TOP6BLQ8N6T0 577 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ZNF513Q8N8E2 541 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 PNPLA1Q8N8W4 532 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 TRIML1Q8N9V2 468 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 OR2I1PQ8NGU4 316 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 MDM1Q8TC05 714 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 OTUB2Q96DC9 234 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 HSPA12BQ96MM6 686 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CAMK1GQ96NX5 476 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 ZHX3Q9H4I2 956 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CFAP97Q9P2B7 532 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 LIMCH1Q9UPQ0 1083 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 R3HCC1Q9Y3T6 440 aaKnown RBP12.12□□□□□ -0.47
CHMP6-202ENST00000571457 CPQQ9Y646 472 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
CHMP6-202ENST00000571457 IGHV1OR15-9A0A0B4J2B8 117 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 GABRDO14764 452 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 NDUFS2O75306 463 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 ITGB3P05106 788 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 HOXB2P14652 356 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 GABRG2P18507 467 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 NTSR1P30989 418 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 GRIK1P39086 918 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 GAD2Q05329 585 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 WDR45BQ5MNZ6 344 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 FAM171BQ6P995 826 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-202ENST00000571457 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 BBC3Q96PG8 261 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-202ENST00000571457 TTLL2Q9BWV7 592 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 RNF38Q9H0F5 515 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 ST6GALNAC4Q9H4F1 302 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
CHMP6-202ENST00000571457 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-202ENST00000571457 DEC1Q9P2X7 70 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms