RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PIK3R2O00459 728 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 CYP26A1O43174 497 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 DCXO43602 365 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 MICAL2O94851 1124 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 LETM1O95202 739 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 FAM200BP0CF97 657 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 VDRP11473 427 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 KRT5P13647 590 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 UCHL3P15374 230 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 CD19P15391 556 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 NPR3P17342 541 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 ANXA13P27216 316 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 CLCN1P35523 988 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 CETN1Q12798 172 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 GRM2Q14416 872 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 DRAP1Q14919 205 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 SYCP1Q15431 976 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 DENND1BQ6P3S1 775 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 VITQ6UXI7 678 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 PIGZQ86VD9 579 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 ARID3BQ8IVW6 561 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 NUP93Q8N1F7 819 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 SLC44A3Q8N4M1 653 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 MAB21L3Q8N8X9 362 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 LEMD2Q8NC56 503 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 WBP2Q969T9 261 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 ACSF2Q96CM8 615 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 CYP2S1Q96SQ9 504 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 DUSP16Q9BY84 665 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 RNF38Q9H0F5 515 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 TASP1Q9H6P5 420 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 NMUR1Q9HB89 426 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMG6-209ENST00000571442 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 CHORDC1Q9UHD1 332 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 CYTH4Q9UIA0 394 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMG6-209ENST00000571442 ARIH1Q9Y4X5 557 aaPredicted RBP7.39□□□□□ -1.23
SMG6-209ENST00000571442 ATP8B3O60423 1300 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 TRIOO75962 3097 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 A0A1B0GTH6 734 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZNF840PA6NDX5 716 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 SHISA7A6NL88 538 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 HEPACAM2A8MVW5 462 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZNF197O14709 1029 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 MDM4O15151 490 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 AP5Z1O43299 807 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 OAS1P00973 400 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 PDGFBP01127 241 aaPredicted RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 PAEPP09466 180 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZDHHC11BP0C7U3 371 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 CDK11BP21127 795 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 CDC25CP30307 473 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 HOXD11P31277 338 aaPredicted RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 RGS7P49802 495 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 KIF11P52732 1056 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 MFAP3P55082 362 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 JAM2P57087 298 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 YWHAEP62258 255 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 GPC5P78333 572 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZXDAP98168 799 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 UBXN1Q04323 297 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 CNGA2Q16280 664 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 TAF12Q16514 161 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 RAB41Q5JT25 222 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 PMF1Q6P1K2 205 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 LRSAM1Q6UWE0 723 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 LCLAT1Q6UWP7 414 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 SCD5Q86SK9 330 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 SLC47A2Q86VL8 602 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 MON1AQ86VX9 555 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 GAS2L3Q86XJ1 694 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 FAM71AQ8IYT1 594 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 WDTC1Q8N5D0 677 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ARL14EPQ8N8R7 260 aaPredicted RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 ANKRD52Q8NB46 1076 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 OLIG1Q8TAK6 271 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 CLEC4CQ8WTT0 213 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 SLC35F5Q8WV83 523 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZNF606Q8WXB4 792 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 SMARCD2Q92925 531 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 USP13Q92995 863 aaPredicted RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 FBXO32Q969P5 355 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ASIC4Q96FT7 647 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 ZFRQ96KR1 1074 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 ERGIC2Q96RQ1 377 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 NAT10Q9H0A0 1025 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 FAM124BQ9H5Z6 455 aaPredicted RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 TRPC7Q9HCX4 862 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 NLRC4Q9NPP4 1024 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 PLCB1Q9NQ66 1216 aa7.38□□□□□ -1.23
SMG6-209ENST00000571442 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
SMG6-209ENST00000571442 FAM207AQ9NSI2 230 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms