RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLDN1O95832 211 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 MT-CO3P00414 261 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 NCAM1P13591 858 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 TNFSF9P41273 254 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 QARSP47897 775 aaKnown RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 UQCRFS1P47985 274 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 ERVPABLB-1P60509 514 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 CLN3Q13286 438 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 SWI5Q1ZZU3 235 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 ANKRD45Q5TZF3 282 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 CENPPQ6IPU0 288 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 XKR5Q6UX68 686 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 B3GNT9Q6UX72 402 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 C12orf40Q86WS4 652 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 MIB1Q86YT6 1006 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 ANKMY2Q8IV38 441 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 MB21D2Q8IYB1 491 aaPredicted RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 FANCBQ8NB91 859 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 ZNF564Q8TBZ8 553 aaPredicted RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 CYP2S1Q96SQ9 504 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 PDZD7Q9H5P4 517 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 CD248Q9HCU0 757 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 XPNPEP1Q9NQW7 623 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 WRAP73Q9P2S5 460 aaPredicted RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 ANKRD6Q9Y2G4 727 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 USP20Q9Y2K6 914 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 SMIM28A0A1B0GU29 152 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 A0A1W2PNU3 283 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 E2F8A0AVK6 867 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 hCG_1984214I3L0E3 225 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 EML1O00423 815 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 N4BP3O15049 544 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 LZTS3O60299 673 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 USP12O75317 370 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 ZNF217O75362 1048 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 CDK4P11802 303 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 GLRA2P23416 452 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 MARCKSP29966 332 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 MCM4P33991 863 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 CASRP41180 1078 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 LSSP48449 732 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 CCT8P50990 548 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 SKOR1P84550 965 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 KDSRQ06136 332 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 GPR17Q13304 367 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 ZNF77Q15935 545 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TAF12Q16514 161 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TBR1Q16650 682 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 XKR9Q5GH70 373 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 CASC1Q6TDU7 716 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 USP53Q70EK8 1073 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 EID2Q8N6I1 236 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 ZNF713Q8N859 430 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 SSC4DQ8WTU2 575 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 RFFLQ8WZ73 363 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 SLC22A12Q96S37 553 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 NFKBIZQ9BYH8 718 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 PRMT7Q9NVM4 692 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 EGFL7Q9UHF1 273 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 ZMYM5Q9UJ78 669 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
CHD3-213ENST00000571249 SLC12A7Q9Y666 1083 aa7.5□□□□□ -1.21
CHD3-213ENST00000571249 TACC2O95359 2948 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 PMS2P1A4D2B8 440 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MTMR11A4FU01 709 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 KCNJ18B7U540 433 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 SH2B2O14492 632 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 ZBTB39O15060 712 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MTSS1O43312 755 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 PRC1O43663 620 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 DKC1O60832 514 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHD3-213ENST00000571249 F11P03951 625 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 SFTPCP11686 197 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 HOXB2P14652 356 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 CD6P30203 668 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 YWHABP31946 246 aaKnown RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 ARL2P36404 184 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 INHBCP55103 352 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 CYP4F2P78329 520 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 ZNF268Q14587 947 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 VEPH1Q14D04 833 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 INF2Q27J81 1249 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 ZC2HC1CQ53FD0 456 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 BMP2KLQ5H9B9 411 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 EEF1DP3Q658K8 133 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 OTUD6AQ7L8S5 288 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MON1AQ86VX9 555 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MICU3Q86XE3 530 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 LSMEM2Q8N112 164 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 REXO1Q8N1G1 1221 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms