RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 DDX43Q9NXZ2 648 aaKnown RBP22.88■■□□□ 1.25
UBFD1-210ENST00000571064 NCANO14594 1321 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 ZNF197O14709 1029 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 TEX33O43247 280 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 ABLIM3O94929 683 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 SEC24AO95486 1093 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 OR4Q2P0C623 313 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 P4HA1P13674 534 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
UBFD1-210ENST00000571064 PMLP29590 882 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 ARPP19P56211 112 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 TPM4P67936 248 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 FANCCQ00597 558 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 GJB7Q6PEY0 223 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 PDZD4Q76G19 769 aaPredicted RBP22.87■■□□□ 1.25
UBFD1-210ENST00000571064 HS6ST3Q8IZP7 471 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 SMARCD2Q92925 531 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 FAXDC2Q96IV6 333 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 CYP3A43Q9HB55 503 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 CYP4F11Q9HBI6 524 aa22.87■■□□□ 1.25
UBFD1-210ENST00000571064 RBM12Q9NTZ6 932 aaKnown RBP22.87■■□□□ 1.25
UBFD1-210ENST00000571064 A0A1B0GTH6 734 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 K7ESF4 209 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 TPM2P07951 284 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 GJA1P17302 382 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 HOXC13P31276 330 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 GNL1P36915 607 aaPredicted RBP22.86■■□□□ 1.25
UBFD1-210ENST00000571064 LHX1P48742 406 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 KLK7P49862 253 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 CUL2Q13617 745 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 CCDC142Q17RM4 750 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 IL31Q6EBC2 164 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 RRAGAQ7L523 313 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 LRRTM3Q86VH5 581 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 LONP2Q86WA8 852 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 SPEM1Q8N4L4 309 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 FAM160A2Q8N612 972 aaPredicted RBP22.86■■□□□ 1.25
UBFD1-210ENST00000571064 UBR7Q8N806 425 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 DDX1Q92499 740 aaKnown RBP22.86■■□□□ 1.25
UBFD1-210ENST00000571064 KREMEN1Q96MU8 473 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 ZCWPW1Q9H0M4 648 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 C2orf42Q9NWW7 574 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 HMGXB4Q9UGU5 601 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 AJAP1Q9UKB5 411 aaPredicted RBP22.86■■□□□ 1.25
UBFD1-210ENST00000571064 SIK3Q9Y2K2 1263 aa22.86■■□□□ 1.25
UBFD1-210ENST00000571064 CNOT1A5YKK6 2376 aaKnown RBP22.86■■□□□ 1.25
UBFD1-210ENST00000571064 OR6C75A6NL08 312 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 ZNF263O14978 683 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 ATP2C2O75185 946 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 MOSPD3O75425 235 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 MICAL2O94851 1124 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 VNN2O95498 520 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 PDGFRBP09619 1106 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 ATF2P15336 505 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 CNR2P34972 360 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 UBXN1Q04323 297 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 Q6ZS52 159 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 TCEAL8Q8IYN2 117 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 THEM5Q8N1Q8 247 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 OR6B3Q8NGW1 331 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 WHAMMQ8TF30 809 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 TWNKQ96RR1 684 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 PKMYT1Q99640 499 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 LPIN3Q9BQK8 851 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 ACBD6Q9BR61 282 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 DPEP3Q9H4B8 488 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 INSL5Q9Y5Q6 135 aa22.85■■□□□ 1.25
UBFD1-210ENST00000571064 ARNTLO00327 626 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 SERPINC1P01008 464 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 CD58P19256 250 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 INCA1Q0VD86 236 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 NR1I3Q14994 352 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 CCDC6Q16204 474 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 AASDHQ4L235 1098 aaPredicted RBP22.84■■□□□ 1.25
UBFD1-210ENST00000571064 FKBP15Q5T1M5 1219 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 CYP4A22Q5TCH4 519 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 PPM1KQ8N3J5 372 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 DEPDC1BQ8WUY9 529 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 LSM14BQ9BX40 385 aaKnown RBP22.84■■□□□ 1.25
UBFD1-210ENST00000571064 OXCT2Q9BYC2 517 aaPredicted RBP22.84■■□□□ 1.25
UBFD1-210ENST00000571064 SNX25Q9H3E2 840 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 CISHQ9NSE2 258 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 TMLHEQ9NVH6 421 aa22.84■■□□□ 1.25
UBFD1-210ENST00000571064 FOXD2O60548 495 aaPredicted RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ACO1P21399 889 aaKnown RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 SOX9P48436 509 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 CDR1P51861 262 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 NDST1P52848 882 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 PSMC1P62191 440 aaKnown RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 GCNT1Q02742 428 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ORC1Q13415 861 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 SF3A2Q15428 464 aaKnown RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 SYCP1Q15431 976 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 INTS6LQ5JSJ4 861 aaKnown RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 CEP68Q76N32 757 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 MFSD6LQ8IWD5 586 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ZSCAN18Q8TBC5 510 aaPredicted RBP22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ERGIC2Q96RQ1 377 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ANP32EQ9BTT0 268 aa22.83■■□□□ 1.25
UBFD1-210ENST00000571064 ELOVL4Q9GZR5 314 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms