RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 PABPC3Q9H361 631 aaKnown RBP13.13□□□□□ -0.31
INO80E-213ENST00000569957 ARL2BPQ9Y2Y0 163 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 NFICP08651 508 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 CPT1AP50416 773 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 SHCBP1LQ9BZQ2 653 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 CDC42EP4Q9H3Q1 356 aaKnown RBP13.13□□□□□ -0.31
INO80E-213ENST00000569957 NOD2Q9HC29 1040 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
INO80E-213ENST00000569957 BAZ2AQ9UIF9 1905 aaKnown RBP13.13□□□□□ -0.31
INO80E-213ENST00000569957 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
INO80E-213ENST00000569957 SOX11P35716 441 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
INO80E-213ENST00000569957 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 STAT4Q14765 748 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 KDM7AQ6ZMT4 941 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 ZNF677Q86XU0 584 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 TTC39CQ8N584 583 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 GAD1Q99259 594 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 TJP2Q9UDY2 1190 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 USP18Q9UMW8 372 aa13.13□□□□□ -0.31
INO80E-213ENST00000569957 TRPA1O75762 1119 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 WRAP73Q9P2S5 460 aaPredicted RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 CCT8L1PA6NM43 557 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 NEMP1O14524 444 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 PBX1P40424 430 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 KDSRQ06136 332 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 FBXO47Q5MNV8 452 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 WDR49Q8IV35 697 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 UNKQ9C0B0 810 aaKnown RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 EPS15L1Q9UBC2 864 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 KCNK1O00180 336 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 PRLRP16471 622 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 ARFIP2P53365 341 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 GTF2BQ00403 316 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 TMTC4Q5T4D3 741 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 CEP70Q8NHQ1 597 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 LENG1Q96BZ8 264 aaPredicted RBP13.12□□□□□ -0.31
INO80E-213ENST00000569957 RAB21Q9UL25 225 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
INO80E-213ENST00000569957 RGS2P41220 211 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 PTGER2P43116 358 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 SV2CQ496J9 727 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 TFDP3Q5H9I0 405 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 EFHD1Q9BUP0 239 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 IGLV3-22A0A075B6J6 115 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 SPECC1L-ADORA2AF8WAN1 911 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 SPTLC1O15269 473 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 RECQL4O94761 1208 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 KRT4P19013 534 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 PCSK1P29120 753 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 RPL21P46778 160 aaKnown RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 COPS2P61201 443 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 PTK7Q13308 1070 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ACTRT1Q8TDG2 376 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 AFF4Q9UHB7 1163 aaKnown RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 ZFP69BQ9UJL9 534 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 ETS1P14921 441 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ZNF235Q14590 738 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ATG16L1Q676U5 607 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 E5RJQ4 531 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 VDRP11473 427 aa13.11□□□□□ -0.31
INO80E-213ENST00000569957 ZFXP17010 805 aaPredicted RBP13.11□□□□□ -0.31
INO80E-213ENST00000569957 BOLA3Q53S33 107 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms