RNA–Protein interactions for RNA: ENST00000569627.1

KATNB1-210, Transcript of katanin regulatory subunit B1, humanhuman

TSL 3

Gene KATNB1, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-210ENST00000569627 PNPLA8Q9NP80 782 aa12.9□□□□□ -0.34
KATNB1-210ENST00000569627 TLR8Q9NR97 1041 aaKnown RBP12.9□□□□□ -0.34
KATNB1-210ENST00000569627 ZNF638Q14966 1978 aaKnown RBP12.9□□□□□ -0.34
KATNB1-210ENST00000569627 KANSL1LA0AUZ9 987 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 LRRN2O75325 713 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 VDRP11473 427 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 AVPR2P30518 371 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 RAD23BP54727 409 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 MFAP3P55082 362 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 GCNT1Q02742 428 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 FCHO2Q0JRZ9 810 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 ZNF268Q14587 947 aaPredicted RBP12.89□□□□□ -0.35
KATNB1-210ENST00000569627 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 STILQ15468 1287 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 MAN2A1Q16706 1144 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
KATNB1-210ENST00000569627 PHLDB3Q6NSJ2 640 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 TPRG1Q6ZUI0 275 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 TADA2BQ86TJ2 420 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
KATNB1-210ENST00000569627 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 ARID3AQ99856 593 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 DUSP16Q9BY84 665 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 INTS2Q9H0H0 1204 aaKnown RBP12.89□□□□□ -0.35
KATNB1-210ENST00000569627 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 TRPV5Q9NQA5 729 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 HEBP1Q9NRV9 189 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 SIT1Q9Y3P8 196 aa12.89□□□□□ -0.35
KATNB1-210ENST00000569627 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 PDGFBP01127 241 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 PAEPP09466 180 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 MBL2P11226 248 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 KRT5P13647 590 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 GLULP15104 373 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 AOC1P19801 751 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 IFNAR2P48551 515 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 PSEN1P49768 467 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 STARD6P59095 220 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 USP46P62068 366 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 NR1H3Q13133 447 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 RRAGAQ7L523 313 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 SLC4A11Q8NBS3 891 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 SMOQ99835 787 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 TUBGCP2Q9BSJ2 902 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
KATNB1-210ENST00000569627 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
KATNB1-210ENST00000569627 OBSL1O75147 1896 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 GTPBP10A4D1E9 387 aaKnown RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 C2orf78A6NCI8 922 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 MED7O43513 233 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 RALAP11233 206 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 CDK11BP21127 795 aaKnown RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 USP8P40818 1118 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 BCAT1P54687 386 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 MTF1Q14872 753 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 GOLGA7BQ2TAP0 167 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 PAQR9Q6ZVX9 377 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ARHGAP18Q8N392 663 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ANKRD52Q8NB46 1076 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 SCAMP5Q8TAC9 235 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 CYP2S1Q96SQ9 504 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 LRRC4Q9HBW1 653 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 NFE2L3Q9Y4A8 694 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 ARIH1Q9Y4X5 557 aaPredicted RBP12.87□□□□□ -0.35
KATNB1-210ENST00000569627 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
KATNB1-210ENST00000569627 NCANO14594 1321 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms