RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CCDC154A6NI56 674 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SIN3BO75182 1162 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CYP2C8P10632 490 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 DDR2Q16832 855 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF420Q8TAQ5 688 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CLIC5Q9NZA1 410 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FETUBQ9UGM5 382 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 LNPEPQ9UIQ6 1025 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 BARX2Q9UMQ3 279 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NDUFAF1Q9Y375 327 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SPEF1Q9Y4P9 236 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF263O14978 683 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PEX1O43933 1283 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 TM7SF2O76062 418 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GJB6O95452 261 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 TSNQ15631 228 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 AGAP9Q5VTM2 703 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ZCCHC9Q8N567 271 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 RDH11Q8TC12 318 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PAFAH2Q99487 392 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GPATCH1Q9BRR8 931 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 EPB41L4AQ9HCS5 686 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 KRCC1Q9NPI7 259 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SLC5A4Q9NY91 659 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ADAM28Q9UKQ2 775 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PEX16Q9Y5Y5 336 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM43BA6NCK2 446 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 DNAJA2O60884 412 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 RECQL5O94762 991 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 IL6P05231 212 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PRKCIP41743 596 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 DYNLT1P63172 113 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ABCB5Q2M3G0 1257 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 RAB43Q86YS6 212 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PQLC1Q8N2U9 271 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FAM13CQ8NE31 585 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NUAK2Q9H093 628 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GSTK1Q9Y2Q3 226 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GOLGA8SH3BPF8 625 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PRPF4O43172 522 aaKnown RBP eCLIP7.35□□□□□ -1.235e-14■■■■■ 28.4
CNOT1-216ENST00000569240 EDF1O60869 148 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NME5P56597 212 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PDK1Q15118 436 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SIX5Q8N196 739 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SNIP1Q8TAD8 396 aaKnown RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SNX19Q92543 992 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GPKOWQ92917 476 aaPredicted RBP eCLIP7.35□□□□□ -1.231e-6■■■□□ 16.4
CNOT1-216ENST00000569240 NSMCE2Q96MF7 247 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 UBP1Q9NZI7 540 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CAPN6Q9Y6Q1 641 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 GMFBP60983 142 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PDK2Q15119 407 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 TAF12Q16514 161 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF829Q3KNS6 432 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 KCTD21Q4G0X4 260 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 NAPEPLDQ6IQ20 393 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 MOXD1Q6UVY6 613 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ADHFE1Q8IWW8 467 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FAM111AQ96PZ2 611 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FOXO3O43524 673 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FDX1P10109 184 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 ITGAXP20702 1163 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SERPINB5P36952 375 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 EGFLAMQ63HQ2 1017 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 SMYD5Q6GMV2 418 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 DEPDC4Q8N2C3 294 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 APPL2Q8NEU8 664 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 STARD8Q92502 1023 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 FCGR1BQ92637 280 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 USP13Q92995 863 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC4Q9HBW1 653 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 VTA1Q9NP79 307 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 CDH9Q9ULB4 789 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 PCDHGA10Q9Y5H3 936 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 AP4B1Q9Y6B7 739 aa7.35□□□□□ -1.23
CNOT1-216ENST00000569240 EFCAB10A6NFE3 127 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 RGS5O15539 181 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 CLDN3O15551 220 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 NOS1APO75052 506 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-216ENST00000569240 CCNKO75909 580 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 DHFRP00374 187 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 SLC9A1P19634 815 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 ACLYP53396 1101 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 FOLH1Q04609 750 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 ST3GAL1Q11201 340 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 VPS72Q15906 364 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 TTI2Q6NXR4 508 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 C12orf56Q8IXR9 622 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 POC5Q8NA72 575 aa7.34□□□□□ -1.23
CNOT1-216ENST00000569240 RNF25Q96BH1 459 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-216ENST00000569240 PLEKHA8Q96JA3 519 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms