RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 GPD2P43304 727 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 SLC8A3P57103 927 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CENPCQ03188 943 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 ADCY1Q08828 1119 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 PDCLQ13371 301 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CLEC16AQ2KHT3 1053 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 DENND1BQ6P3S1 775 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 LILRA6Q6PI73 481 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 TTC9BQ8N6N2 239 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 ATAD1Q8NBU5 361 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 TMEM35BQ8NCS4 154 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 MICAL1Q8TDZ2 1067 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 PCDHB18PQ96TA0 734 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 DUSP16Q9BY84 665 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 RHOBTB2Q9BYZ6 727 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CRISPLD1Q9H336 500 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 LMCD1Q9NZU5 365 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 ADAMTS1Q9UHI8 967 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 ZNF638Q14966 1978 aaKnown RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 MYO7AQ13402 2215 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 OBSL1O75147 1896 aa11.02□□□□□ -0.64
CDH3-210ENST00000569117 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 TGM5O43548 720 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 AKR1B10O60218 316 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 CLASP2O75122 1294 aaKnown RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 NDUFA10O95299 355 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 HAPLN1P10915 354 aaPredicted RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 GZMAP12544 262 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 CYP2F1P24903 491 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 KLRC2P26717 231 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 RPL34P49207 117 aaKnown RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 CLCN4P51793 760 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 GFPT1Q06210 699 aaPredicted RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 MTF1Q14872 753 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 DUSP6Q16828 381 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 ZNF697Q5TEC3 545 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 NAA35Q5VZE5 725 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 BLOC1S3Q6QNY0 202 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 RAD9BQ6WBX8 426 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 ADGRD2Q7Z7M1 963 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 TCEAL8Q8IYN2 117 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 UBA3Q8TBC4 463 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 SLC35F5Q8WV83 523 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 CEP295NLQ96MC4 621 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 NOX5Q96PH1 765 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 EIF3CQ99613 913 aaKnown RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 CDCA3Q99618 268 aaPredicted RBP11.02□□□□□ -0.65
CDH3-210ENST00000569117 SMOQ99835 787 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH3-210ENST00000569117 CYLDQ9NQC7 956 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 CYTH4Q9UIA0 394 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 NAGPAQ9UK23 515 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 YIPF1Q9Y548 306 aa11.02□□□□□ -0.65
CDH3-210ENST00000569117 MYO9BQ13459 2157 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 HHLA1C9JL84 531 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 F8VP50 259 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 RFXAPO00287 272 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 TULP2O00295 520 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 ZNF263O14978 683 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 BEST1O76090 585 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 IPO7O95373 1038 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 SEC24AO95486 1093 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 ATF6P18850 670 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 MMP8P22894 467 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 NSFP46459 744 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 TUFMP49411 452 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 MAP3K7CLP57077 242 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 RPL10AP62906 217 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 DUSP4Q13115 394 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 PTPN20Q4JDL3 420 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 ACAD10Q6JQN1 1059 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 MON1BQ7L1V2 547 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 PIGZQ86VD9 579 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 WDTC1Q8N5D0 677 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 MSANTD4Q8NCY6 345 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 SLC22A17Q8WUG5 538 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 KCTD13Q8WZ19 329 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 LRCH3Q96II8 777 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 CPXM1Q96SM3 734 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 SEPT5Q99719 369 aaPredicted RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 UBXN6Q9BZV1 441 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms