RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	TGM2	P21980	687 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	CDH6	P55285	790 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	CDH8	P55286	799 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	INCA1	Q0VD86	236 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	KRT81	Q14533	505 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	BOLA3	Q53S33	107 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	FNBP1L	Q5T0N5	605 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	ANKRD22	Q5VYY1	191 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	UNC45B	Q8IWX7	931 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	ZNF75CP	Q92670	426 aa	Predicted RBP	13.24	□□□□□ -0.29
PKM-222	ENST00000568883	USP6NL	Q92738	828 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	TMEM237	Q96Q45	408 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	TBCB	Q99426	244 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	TUBB6	Q9BUF5	446 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	SDCBP2	Q9H190	292 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	LRMDA	Q9H2I8	198 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	KIF9	Q9HAQ2	790 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	ETNK1	Q9HBU6	452 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	NOP53	Q9NZM5	478 aa	Known RBP	13.24	□□□□□ -0.29
PKM-222	ENST00000568883	SAE1	Q9UBE0	346 aa	Predicted RBP	13.24	□□□□□ -0.29
PKM-222	ENST00000568883	COL1A2	P08123	1366 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	GPR25	O00155	361 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TOMM70	O94826	608 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	ENDOD1	O94919	500 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	PGK2	P07205	417 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	INHBA	P08476	426 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	SETSIP	P0DME0	302 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	PDGFRA	P16234	1089 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	SSTR1	P30872	391 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	HIRA	P54198	1017 aa	Predicted RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	MGAT5	Q09328	741 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	LAMC2	Q13753	1193 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	SLC1A5	Q15758	541 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	SLC45A4	Q5BKX6	768 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	LGSN	Q5TDP6	509 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	LCLAT1	Q6UWP7	414 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	FBXO16	Q8IX29	292 aa	Predicted RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	KIAA0319L	Q8IZA0	1049 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TEKT4	Q8WW24	435 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	ERP27	Q96DN0	273 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	MRRF	Q96E11	262 aa	Known RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	NT5C1A	Q9BXI3	368 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	MYLK2	Q9H1R3	596 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	PNMA3	Q9UL41	463 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883		A0A1W2PPM1	405 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	C2CD4B	A6NLJ0	364 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	ZNF487	B1APH4	448 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883		H7C0C1	242 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	DPYSL4	O14531	572 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TMEM63A	O94886	807 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	GSTA2	P09210	222 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	CD48	P09326	243 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	ATP5O	P48047	213 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	ZNF200	P98182	395 aa	Predicted RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	E2F5	Q15329	346 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	OR6B2	Q6IFH4	312 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	FASTKD5	Q7L8L6	764 aa	Known RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	BANP	Q8N9N5	519 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	DCAKD	Q8WVC6	231 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TRAPPC12	Q8WVT3	735 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TBC1D31	Q96DN5	1066 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	OTUD5	Q96G74	571 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	RSRC1	Q96IZ7	334 aa	Known RBP	13.23	□□□□□ -0.29
PKM-222	ENST00000568883	FGD4	Q96M96	766 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TWNK	Q96RR1	684 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	DNAI2	Q9GZS0	605 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	PDZD7	Q9H5P4	517 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	MINDY3	Q9H8M7	445 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	TJP2	Q9UDY2	1190 aa		13.23	□□□□□ -0.29
PKM-222	ENST00000568883	C2CD2L	O14523	706 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	APOL1	O14791	398 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	PEX10	O60683	326 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	KRT16	P08779	473 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	MSS51	Q4VC12	460 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	CDR2L	Q86X02	465 aa	Predicted RBP	13.22	□□□□□ -0.29
PKM-222	ENST00000568883	ZDHHC17	Q8IUH5	632 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	ANKRD13A	Q8IZ07	590 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	SHCBP1	Q8NEM2	672 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.22	□□□□□ -0.29
PKM-222	ENST00000568883	C10orf82	Q8WW14	230 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	RXFP2	Q8WXD0	754 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	FAF2	Q96CS3	445 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	RTP4	Q96DX8	246 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	ACAP3	Q96P50	834 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	RNF157	Q96PX1	679 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	KLC2	Q9H0B6	622 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	ELP3	Q9H9T3	547 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	EBF2	Q9HAK2	575 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	PNPLA8	Q9NP80	782 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	SAR1A	Q9NR31	198 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	ADARB2	Q9NS39	739 aa	Known RBP	13.22	□□□□□ -0.29
PKM-222	ENST00000568883	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.22	□□□□□ -0.29
PKM-222	ENST00000568883	RPL26L1	Q9UNX3	145 aa	Known RBP	13.22	□□□□□ -0.29
PKM-222	ENST00000568883	AKT3	Q9Y243	479 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	STK38L	Q9Y2H1	464 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	LRRC37A2	A6NM11	1700 aa		13.22	□□□□□ -0.29
PKM-222	ENST00000568883	SPDYE5	A6NIY4	337 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	LPXN	O60711	386 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms