RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MYH10P35580 1976 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 LNP1A1A4G5 178 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 C4orf47A7E2U8 309 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 PATE3B3GLJ2 98 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 CLDN5O00501 218 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 TRIM66O15016 1216 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 CAVIN2O95810 425 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 PDE6CP51160 858 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 TNNC1P63316 161 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 KDSRQ06136 332 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 CYP24A1Q07973 514 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 TAF10Q12962 218 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 FAM26FQ5R3K3 315 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 PMS2CLQ68D20 193 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 C12orf40Q86WS4 652 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 MDGA1Q8NFP4 955 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 ELMO3Q96BJ8 720 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 C8orf48Q96LL4 319 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 TFIP11Q9UBB9 837 aaKnown RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 MMP17Q9ULZ9 603 aa16.54■□□□□ 0.24
NME3-211ENST00000568561 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
NME3-211ENST00000568561 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 GIPC1O14908 333 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
NME3-211ENST00000568561 STX6O43752 255 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 CLSTN1O94985 981 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 OLFM2O95897 454 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 OAS1P00973 400 aaKnown RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 MBL2P11226 248 aaPredicted RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 PTPN1P18031 435 aaKnown RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 MYL6P60660 151 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 NOP14P78316 857 aaKnown RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 SLC7A9P82251 487 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 PSMD6Q15008 389 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 DHCR24Q15392 516 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 WDR72Q3MJ13 1102 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 TMEM92Q6UXU6 159 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 ALLCQ8N6M5 410 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 LINC00301Q8NCQ3 95 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 ZNF507Q8TCN5 953 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 CNOT6LQ96LI5 555 aaKnown RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 FNBP1Q96RU3 617 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 B3GNT5Q9BYG0 378 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
NME3-211ENST00000568561 ASCC3Q8N3C0 2202 aaKnown RBP16.53■□□□□ 0.24
NME3-211ENST00000568561 A8MXQ7 604 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 SPTLC2O15270 562 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 TACC1O75410 805 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 KLF8O95600 359 aaPredicted RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 TIE1P35590 1138 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 DHPSP49366 369 aaPredicted RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 CASP4P49662 377 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 CRY1Q16526 586 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 USP39Q53GS9 565 aaKnown RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 EMC10Q5UCC4 262 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 TDRD10Q5VZ19 366 aaKnown RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 SHC4Q6S5L8 630 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 ARMCX6Q7L4S7 300 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 CYP2U1Q7Z449 544 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 RASSF3Q86WH2 238 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 B3GALNT2Q8NCR0 500 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 SCFD1Q8WVM8 642 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 RLN3Q8WXF3 142 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
NME3-211ENST00000568561 ZNF516Q92618 1163 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 ELOVL4Q9GZR5 314 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 BLZF1Q9H2G9 400 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 SMYD3Q9H7B4 428 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 EHD2Q9NZN4 543 aa16.52■□□□□ 0.24
NME3-211ENST00000568561 CEP192Q8TEP8 1941 aa16.52■□□□□ 0.23
NME3-211ENST00000568561 PLXND1Q9Y4D7 1925 aa16.52■□□□□ 0.23
NME3-211ENST00000568561 PI4KAP42356 2102 aa16.52■□□□□ 0.23
NME3-211ENST00000568561 AKAP13Q12802 2813 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 ADAMTS9Q9P2N4 1935 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 SGK1O00141 431 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 KAT7O95251 611 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 CHRM1P11229 460 aaPredicted RBP16.51■□□□□ 0.23
NME3-211ENST00000568561 PFKLP17858 780 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 RHBDF2Q6PJF5 856 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 FRMD1Q8N878 549 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 IL17RCQ8NAC3 791 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 XXYLT1Q8NBI6 393 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 TXNDC5Q8NBS9 432 aaKnown RBP16.51■□□□□ 0.23
NME3-211ENST00000568561 CCDC26Q8TAB7 109 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 SLITRK1Q96PX8 696 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 KCNK16Q96T55 309 aa16.51■□□□□ 0.23
NME3-211ENST00000568561 LRRC27Q9C0I9 530 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms