RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LRRC15Q8TF66 581 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 DHX58Q96C10 678 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 HPDLQ96IR7 371 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 USP28Q96RU2 1077 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PI4K2AQ9BTU6 479 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 STRA6Q9BX79 667 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC46A2Q9BY10 475 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 LRRC3Q9BY71 257 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SAP130Q9H0E3 1048 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CRISPLD1Q9H336 500 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SNX25Q9H3E2 840 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 KIF9Q9HAQ2 790 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MAGEF1Q9HAY2 307 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PDE11AQ9HCR9 933 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ABCB6Q9NP58 842 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PRMT8Q9NR22 394 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GKN1Q9NS71 199 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TDP1Q9NUW8 608 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GDAP2Q9NXN4 497 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CGNQ9P2M7 1197 aaKnown RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 USP18Q9UMW8 372 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC8A2Q9UPR5 921 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MTMR6Q9Y217 621 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 EP300Q09472 2414 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GREB1Q4ZG55 1949 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MYO18AQ92614 2054 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 MYOFQ9NZM1 2061 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TSC2P49815 1807 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 USP34Q70CQ2 3546 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FRMD3A2A2Y4 597 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 MYBPHLA2RUH7 354 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 POLR2DO15514 142 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FOXD2O60548 495 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 LILRB5O75023 590 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 VNN2O95498 520 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 YEATS4O95619 227 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 F11P03951 625 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CKMP06732 381 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM163BP0C2L3 166 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DLATP10515 647 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CHRNB1P11230 501 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ATF6P18850 670 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 HDCP19113 662 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ACAT1P24752 427 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CYP2F1P24903 491 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CTHP32929 405 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 GNL1P36915 607 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 PPP3CCP48454 512 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 IFNAR2P48551 515 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 MASP1P48740 699 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CASP5P51878 434 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 EPHA4P54764 986 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 NLRP12P59046 1061 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 COPS2P61201 443 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TNNC1P63316 161 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CYP4F8P98187 520 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CYP27A1Q02318 531 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 LMNB2Q03252 620 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FZD5Q13467 585 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 RUNX3Q13761 415 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 SIM2Q14190 667 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF268Q14587 947 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 KCNB1Q14721 858 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 PDGFRLQ15198 375 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 SNRNP35Q16560 246 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DDR2Q16832 855 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 RSPO4Q2I0M5 234 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 INTS6LQ5JSJ4 861 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM26FQ5R3K3 315 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 STXBP5Q5T5C0 1151 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 HEATR6Q6AI08 1181 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 LAIR1Q6GTX8 287 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 VSTM1Q6UX27 236 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 C11orf96Q7Z7L8 435 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 MON1AQ86VX9 555 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 LONP2Q86WA8 852 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 WDR49Q8IV35 697 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 EFCAB13Q8IY85 973 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ADGRF2Q8IZF7 708 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CPA6Q8N4T0 437 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DCLK2Q8N568 766 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TTC9BQ8N6N2 239 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 C1orf127Q8N9H9 656 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 XXYLT1Q8NBI6 393 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 SUMF1Q8NBK3 374 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 OR6B3Q8NGW1 331 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 GOLGA5Q8TBA6 731 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 LEO1Q8WVC0 666 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF516Q92618 1163 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 FUBP3Q96I24 572 aaKnown RBP eCLIP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ZFYVE19Q96K21 471 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 SCYL1Q96KG9 808 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CEP295NLQ96MC4 621 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DEPDC7Q96QD5 511 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 C7orf25Q9BPX7 421 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CBWD1Q9BRT8 395 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TRIM9Q9C026 710 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms