RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 UBR7Q8N806 425 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TEKT4Q8WW24 435 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF75CPQ92670 426 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 PRCCQ92733 491 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 NSL1Q96IY1 281 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ACO2Q99798 780 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CNPY3Q9BT09 278 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC28BQ9BUN5 200 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TSSK1BQ9BXA7 367 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 BCAS3Q9H6U6 928 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 RNPEPL1Q9HAU8 725 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 XAB2Q9HCS7 855 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF277Q9NRM2 450 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ABCF3Q9NUQ8 709 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 MKS1Q9NXB0 559 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 HESX1Q9UBX0 185 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 MID2Q9UJV3 735 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CPSF3Q9UKF6 684 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ANGPTL2Q9UKU9 493 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TNFSF13BQ9Y275 285 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 STK38LQ9Y2H1 464 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 IVNS1ABPQ9Y6Y0 642 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CNTNAP2Q9UHC6 1331 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 GOLGA8QA0A0J9YX86 632 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 GOLGA8OA6NCC3 632 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 HACD1B0YJ81 288 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 GOLGA8NF8WBI6 632 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 COPEO14579 308 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 BIRC5O15392 142 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TYROBPO43914 113 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 CST8O60676 142 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 KRT4P19013 534 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 GPD1P21695 349 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 RXRBP28702 533 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 GARSP41250 739 aaKnown RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 GABRB2P47870 512 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 SERPINB4P48594 390 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ALDH5A1P51649 535 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF143P52747 638 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TAS2R40P59535 323 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 RBP5P82980 135 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TFAMQ00059 246 aaKnown RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 KRT81Q14533 505 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 E2F5Q15329 346 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TARBP2Q15633 366 aaKnown RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TAZQ16635 292 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 FAM187BQ17R55 369 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 Q3C1V9 767 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 MAP3K21Q5TCX8 1036 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ATF7IP2Q5U623 682 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 LVRNQ6Q4G3 990 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ARCQ7LC44 396 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 PHLDB2Q86SQ0 1253 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 LRRC6Q86X45 466 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 RHPN2Q8IUC4 686 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 PASD1Q8IV76 773 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 NAT8LQ8N9F0 302 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 MCUQ8NE86 351 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 REPS2Q8NFH8 660 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ACTL9Q8TC94 416 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ACMSDQ8TDX5 336 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 STK32AQ8WU08 396 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 NSMCE1Q8WV22 266 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TMEM143Q96AN5 459 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ERP27Q96DN0 273 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 WRNIP1Q96S55 665 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 PAFAH2Q99487 392 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 TRIM6Q9C030 488 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 PLSCR2Q9NRY7 297 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 DNAJB4Q9UDY4 337 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 XPO7Q9UIA9 1087 aaKnown RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ITGA11Q9UKX5 1188 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF214Q9UL59 606 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 R3HDM2Q9Y2K5 976 aaKnown RBP7.97□□□□□ -1.13
ATXN3-250ENST00000568290 DERAQ9Y315 318 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 NUB1Q9Y5A7 615 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 SCN9AQ15858 1988 aa7.97□□□□□ -1.13
ATXN3-250ENST00000568290 A6NJR5 290 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ASB14A6NK59 587 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 F8W8V4 182 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 H7C0C1 242 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 APOL1O14791 398 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 GYG2O15488 501 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SNUPNO95149 360 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ADH1BP00325 375 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 RBP3P10745 1247 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ESRRAP11474 423 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms