RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 TMC3Q7Z5M5 1100 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 SRGAP1Q7Z6B7 1085 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 KIAA1328Q86T90 577 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 NME8Q8N427 588 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 LINC01465Q8N7H1 131 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 LMO3Q8TAP4 145 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 PLEKHO2Q8TD55 490 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 KLHL6Q8WZ60 621 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 KAT2BQ92831 832 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 FAM81BQ96LP2 452 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 C16orf45Q96MC5 204 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-218ENST00000568153 NLRP4Q96MN2 994 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 DESI2Q9BSY9 194 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 KATNAL1Q9BW62 490 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 INO80BQ9C086 356 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-218ENST00000568153 ARHGAP39Q9C0H5 1083 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 TMEM117Q9H0C3 514 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 CCDC113Q9H0I3 377 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 SIX2Q9NPC8 291 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 UBE2TQ9NPD8 197 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-218ENST00000568153 PRMT7Q9NVM4 692 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-218ENST00000568153 RAB20Q9NX57 234 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 RNF186Q9NXI6 227 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 ACTR10Q9NZ32 417 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 GCNT4Q9P109 453 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 ARHGAP20Q9P2F6 1191 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 COQ4Q9Y3A0 265 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
CAPN3-218ENST00000568153 PCDHA13Q9Y5I0 950 aa6.61□□□□□ -1.35
CAPN3-218ENST00000568153 A0A087WZ62 844 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 SMIM35A0A1B0GVV1 85 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 LRRIQ3A6PVS8 624 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 HAS3O00219 553 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 FOXN3O00409 490 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 OGTO15294 1046 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 SEPT4O43236 478 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ADCY6O43306 1168 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 KIF5CO60282 957 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ZC3H11AO75152 810 aaKnown RBP eCLIP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 LCA5LO95447 670 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 F2P00734 622 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 C4BPAP04003 597 aaKnown RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 VTNP04004 478 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ADRB2P07550 413 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 C6orf222P0C671 652 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 RARBP10826 455 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 FUT4P22083 530 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ANXA13P27216 316 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 TPP2P29144 1249 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 CASQ1P31415 396 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 SOX5P35711 763 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MXI1P50539 228 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 GPC3P51654 580 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 TERF1P54274 439 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MFAP3P55082 362 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 JAM2P57087 298 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 GJA9P57773 515 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 NLRP11P59045 1033 aaKnown RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 GNG11P61952 73 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 BEX3Q00994 111 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 POU5F1Q01860 360 aaKnown RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MBTD1Q05BQ5 628 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MCL1Q07820 350 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 DRAP1Q14919 205 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 KYAT1Q16773 422 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 BBS9Q3SYG4 887 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 EPC2Q52LR7 807 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 C10orf76Q5T2E6 689 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 CRELD2Q6UXH1 353 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 SYT10Q6XYQ8 523 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ANKS3Q6ZW76 656 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 APBB1IPQ7Z5R6 666 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ZNF410Q86VK4 478 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 VPS36Q86VN1 386 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 C7orf31Q8N865 590 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ACRBPQ8NEB7 543 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 FBXL13Q8NEE6 735 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 TRPV1Q8NER1 839 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 HNRNPLLQ8WVV9 542 aaKnown RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ZBTB10Q96DT7 871 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 ZNF668Q96K58 619 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 FDXACB1Q9BRP7 624 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 MTG1Q9BT17 334 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 HAPLN2Q9GZV7 340 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
CAPN3-218ENST00000568153 HAUS4Q9H6D7 363 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 IFT122Q9HBG6 1241 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 PDE11AQ9HCR9 933 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 PTPRHQ9HD43 1115 aa6.6□□□□□ -1.35
CAPN3-218ENST00000568153 LUC7LQ9NQ29 371 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms