RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 NAB2Q15742 525 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 CPSF6Q16630 551 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG1-214ENST00000568038 PTPN21Q16825 1174 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 ZACNQ401N2 412 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 FKBP15Q5T1M5 1219 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 FAM109BQ6ICB4 259 aaPredicted RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 C15orf39Q6ZRI6 1047 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 LRRC43Q8N309 656 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 PHOSPHO2Q8TCD6 241 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 TAS1R2Q8TE23 839 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 SEMA4DQ92854 862 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 ZNF689Q96CS4 500 aaPredicted RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 PAAF1Q9BRP4 392 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 PI4K2AQ9BTU6 479 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 MRPL9Q9BYD2 267 aaKnown RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 NRDE2Q9H7Z3 1164 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 PIDD1Q9HB75 910 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 DNAJB4Q9UDY4 337 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 ITGA11Q9UKX5 1188 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 AGAP1Q9UPQ3 857 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 R3HCC1Q9Y3T6 440 aaKnown RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 INSL6Q9Y581 213 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 RALGAPA2Q2PPJ7 1873 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 MKI67P46013 3256 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 FSD2A1L4K1 749 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 NT5C1B-RDH14C9J2C7 533 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 PODXLO00592 558 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 PPEF2O14830 753 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 MYOGP15173 224 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 SLC9A1P19634 815 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 CYP3A5P20815 502 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 IGFBP6P24592 240 aaPredicted RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 PBX3P40426 434 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 OR1G1P47890 313 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 CLCNKBP51801 687 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 RBP5P82980 135 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 DSC1Q08554 894 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 CETN1Q12798 172 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 LRMPQ12912 555 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMG1-214ENST00000568038 EPC2Q52LR7 807 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 C9orf57Q5W0N0 161 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 GBP6Q6ZN66 633 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 COLGALT2Q8IYK4 626 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 CMTR2Q8IYT2 770 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 FBXL13Q8NEE6 735 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 HASPINQ8TF76 798 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 RAD9AQ99638 391 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 XPO4Q9C0E2 1151 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 INTS2Q9H0H0 1204 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 CWH43Q9H720 699 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 GRPEL1Q9HAV7 217 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 RAB20Q9NX57 234 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 FAN1Q9Y2M0 1017 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 PRG3Q9Y2Y8 225 aaPredicted RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 MRPL42Q9Y6G3 142 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 TDRD15B5MCY1 1934 aaKnown RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
SMG1-214ENST00000568038 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
SMG1-214ENST00000568038 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 LCHNA4D1U4 455 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 F8W810 466 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 PIRO00625 290 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 NRP1O14786 923 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 PMM2O15305 246 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 TMPRSS2O15393 492 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 P4HA2O15460 535 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 CBFA2T2O43439 604 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 RNGTTO60942 597 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 B3GAT3O94766 335 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 ALDH2P05091 517 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 TPM3P06753 285 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 GALTP07902 379 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 GSTP1P09211 210 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 LRPAP1P30533 357 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 RPL9P32969 192 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 BMP8BP34820 402 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 SLC11A1P49279 550 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 ALDH7A1P49419 539 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 KLK7P49862 253 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 BCAR1P56945 870 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 APBA1Q02410 837 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 NR1I3Q14994 352 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 SYCP1Q15431 976 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 UPP1Q16831 310 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 EXOC3L4Q17RC7 722 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 ZNF699Q32M78 642 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 SPOPLQ6IQ16 392 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms