RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SOX4Q06945 474 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-221ENST00000567935 GPS2Q13227 327 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 ZNF211Q13398 564 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-221ENST00000567935 GOLGA7BQ2TAP0 167 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 PKDCCQ504Y2 493 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 ASCL5Q7RTU5 278 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 XYLT1Q86Y38 959 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 RCOR2Q8IZ40 523 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 ADGRF2Q8IZF7 708 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 C12orf50Q8NA57 414 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-221ENST00000567935 UROC1Q96N76 676 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 MCEEQ96PE7 176 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 AP1M1Q9BXS5 423 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 TRIM7Q9C029 511 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 VIPAS39Q9H9C1 493 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 PTPRZ1P23471 2315 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-221ENST00000567935 COL4A6Q14031 1691 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 FAM170AA1A519 330 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 MAP2K7O14733 419 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 RAD51CO43502 376 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 CKBP12277 381 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 MLH1P40692 756 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 ACADSBP45954 432 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 BCAT1P54687 386 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 GRIK3Q13003 919 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 HADHQ16836 314 aaKnown RBP15.36■□□□□ 0.05
COMMD4-221ENST00000567935 C2CD6Q53TS8 623 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 EP400NLQ6ZTU2 488 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 ACOT1Q86TX2 421 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 SUGP1Q8IWZ8 645 aaKnown RBP15.36■□□□□ 0.05
COMMD4-221ENST00000567935 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 AENQ8WTP8 325 aaKnown RBP15.36■□□□□ 0.05
COMMD4-221ENST00000567935 KBTBD7Q8WVZ9 684 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 ATOH1Q92858 354 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-221ENST00000567935 PABPC5Q96DU9 382 aaKnown RBP15.36■□□□□ 0.05
COMMD4-221ENST00000567935 CPXM1Q96SM3 734 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 GAD1Q99259 594 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 FTHL17Q9BXU8 183 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 FUT8Q9BYC5 575 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 RSAD1Q9HA92 442 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 FAM53CQ9NYF3 392 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 PCYOX1Q9UHG3 505 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 FAM50BQ9Y247 325 aa15.36■□□□□ 0.05
COMMD4-221ENST00000567935 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 BHMG1C9JSJ3 638 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 PODXLO00592 558 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 SPTLC1O15269 473 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 EOMESO95936 686 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 ERBB2P04626 1255 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 KRT7P08729 469 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 PTPN7P35236 360 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 LHX1P48742 406 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 SLC8A3P57103 927 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 GUCY2DQ02846 1103 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 ORC1Q13415 861 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 BFSP2Q13515 415 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 PPP1R26Q5T8A7 1209 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 CYP4A22Q5TCH4 519 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 AGMOQ6ZNB7 445 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 TRIM67Q6ZTA4 783 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 PHLDB2Q86SQ0 1253 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 TMEM110Q86TL2 294 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 KRT222Q8N1A0 295 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 GSTCDQ8NEC7 633 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 CAVIN3Q969G5 261 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 HSFY1Q96LI6 401 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 ZFP42Q96MM3 310 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 ADAM2Q99965 735 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 FAM129AQ9BZQ8 928 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 EPB41L5Q9HCM4 733 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 FAM114A2Q9NRY5 505 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 CYTH4Q9UIA0 394 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 UTP11Q9Y3A2 253 aaKnown RBP15.35■□□□□ 0.05
COMMD4-221ENST00000567935 CACNA1HO95180 2353 aa15.35■□□□□ 0.05
COMMD4-221ENST00000567935 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 CYB561D2O14569 222 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 GABRDO14764 452 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 GJB5O95377 273 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 GLI1P08151 1106 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 PSMA2P25787 234 aa15.34■□□□□ 0.05
COMMD4-221ENST00000567935 RPL34P49207 117 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 DRG2P55039 364 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 VCPP55072 806 aaKnown RBP15.34■□□□□ 0.05
COMMD4-221ENST00000567935 SLC7A5Q01650 507 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms