RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 MMP17Q9ULZ9 603 aa24.44■■□□□ 1.5
CNEP1R1-209ENST00000567712 PLXND1Q9Y4D7 1925 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 CLIC2O15247 247 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 ABL1P00519 1130 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 DLATP10515 647 aaKnown RBP24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 ANXA13P27216 316 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 NOP14P78316 857 aaKnown RBP24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 SURF1Q15526 300 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 CRY1Q16526 586 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 RHBDF2Q6PJF5 856 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 HS2ST1Q7LGA3 356 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 ALLCQ8N6M5 410 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 ZNF507Q8TCN5 953 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 CNOT6LQ96LI5 555 aaKnown RBP24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 C8orf48Q96LL4 319 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 TRIM9Q9C026 710 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 FOXD4L1Q9NU39 408 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 R3HCC1Q9Y3T6 440 aaKnown RBP24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 MYH10P35580 1976 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 ADAMTS9Q9P2N4 1935 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 PCNX2A6NKB5 2137 aa24.43■■□□□ 1.5
CNEP1R1-209ENST00000567712 CDX4O14627 284 aaPredicted RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 TRIM66O15016 1216 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 TACC1O75410 805 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 PFKLP17858 780 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 PTPN1P18031 435 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 NASPP49321 788 aaPredicted RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 MAPRE1Q15691 268 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 SNRNP35Q16560 246 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 USP39Q53GS9 565 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 OR6B3Q8NGW1 331 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 RLN3Q8WXF3 142 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 ELMO3Q96BJ8 720 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 CEP295NLQ96MC4 621 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 B3GNT5Q9BYG0 378 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 AGPAT3Q9NRZ7 376 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 CFAP97Q9P2B7 532 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 RALYQ9UKM9 306 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 ASPMQ8IZT6 3477 aa24.42■■□□□ 1.5
CNEP1R1-209ENST00000567712 SGK1O00141 431 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 CASP1P29466 404 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 PDE6CP51160 858 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 NOVA1P51513 510 aaKnown RBP24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 CYP24A1Q07973 514 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 IFRD2Q12894 506 aaPredicted RBP24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 TTC30AQ86WT1 665 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 IL17RCQ8NAC3 791 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 TXNDC5Q8NBS9 432 aaKnown RBP24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 LINC00301Q8NCQ3 95 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 OLIG1Q8TAK6 271 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 CCDC127Q96BQ5 260 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 CGRRF1Q99675 332 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 TNMDQ9H2S6 317 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 SNX25Q9H3E2 840 aa24.41■■□□□ 1.5
CNEP1R1-209ENST00000567712 KLF8O95600 359 aaPredicted RBP24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 TOP3BO95985 862 aaKnown RBP24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 TNNI1P19237 187 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 TIE1P35590 1138 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 CYP2J2P51589 502 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 MYL6P60660 151 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 IRX4P78413 519 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 PSMD6Q15008 389 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 WDR72Q3MJ13 1102 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 NELFCDQ8IXH7 590 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 PLEKHO2Q8TD55 490 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 SCFD1Q8WVM8 642 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 WBP2Q969T9 261 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 ZFRQ96KR1 1074 aaKnown RBP24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 XYLT2Q9H1B5 865 aa24.4■■□□□ 1.5
CNEP1R1-209ENST00000567712 CACNA1EQ15878 2313 aa24.39■■□□□ 1.5
CNEP1R1-209ENST00000567712 EIF3DO15371 548 aaKnown RBP eCLIP24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 ADAM23O75077 832 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 KIR2DL1P43626 348 aaPredicted RBP24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 MRPS21P82921 87 aaKnown RBP24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 PHTF2Q8N3S3 785 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 DHX58Q96C10 678 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 FNBP1Q96RU3 617 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 KCNK16Q96T55 309 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 PNKPQ96T60 521 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 KIAA1586Q9HCI6 787 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 TFIP11Q9UBB9 837 aaKnown RBP24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 MBD1Q9UIS9 605 aaPredicted RBP24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 WASF3Q9UPY6 502 aa24.39■■□□□ 1.49
CNEP1R1-209ENST00000567712 KAT7O95251 611 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 MBL2P11226 248 aaPredicted RBP24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 SPINK2P20155 84 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 PPP3CCP48454 512 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 DHPSP49366 369 aaPredicted RBP24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 CASP4P49662 377 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 ASIC1P78348 528 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 KDSRQ06136 332 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 EHHADHQ08426 723 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 STK38Q15208 465 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 FAM26FQ5R3K3 315 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 SH3PXD2AQ5TCZ1 1133 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 TDRD10Q5VZ19 366 aaKnown RBP24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 PAQR9Q6ZVX9 377 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 STXBP4Q6ZWJ1 553 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 CYP2U1Q7Z449 544 aa24.38■■□□□ 1.49
CNEP1R1-209ENST00000567712 SCAMP5Q8TAC9 235 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms