RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 COL15A1P39059 1388 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 SMIM31A0A1B0GVY4 71 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 MOCS2O96007 188 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 SKIV2L2P42285 1042 aaKnown RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 PHKA2P46019 1235 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 SLC1A6P48664 564 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 GPSM2P81274 684 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 RUNX1T1Q06455 604 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 PTK6Q13882 451 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 RBM44Q6ZP01 1051 aaKnown RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM167AQ96KS9 214 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ECSITQ9BQ95 431 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 THAP1Q9NVV9 213 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF263O14978 683 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 SERPINI2O75830 405 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 PTGER2P43116 358 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 PDK4Q16654 411 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 KBTBD12Q3ZCT8 623 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 DEPDC1Q5TB30 811 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 TBX20Q9UMR3 447 aa12.83□□□□□ -0.35
CSPG4P13-202ENST00000567704 ALADP13716 330 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 MARCKSL1P49006 195 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 LAMC2Q13753 1193 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 CLEC16AQ2KHT3 1053 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 DENND1BQ6P3S1 775 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPATA20Q8TB22 786 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 NRDE2Q9H7Z3 1164 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TOPORSQ9NS56 1045 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PACSIN3Q9UKS6 424 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 KBTBD13C9JR72 458 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TGM2P21980 687 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 CHKAP35790 457 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 AVPR1AP37288 418 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SULT1E1P49888 294 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 NRF1Q16656 503 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TDRD5Q8NAT2 981 aaKnown RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAM162AQ96A26 154 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 RRN3Q9NYV6 651 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PCYOX1Q9UHG3 505 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TLR2O60603 784 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PIAS1O75925 651 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 FKBP9O95302 570 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PRKCBP05771 671 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PRKCIP41743 596 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 PLIN5Q00G26 463 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 BNIP1Q12981 228 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SLC5A9Q2M3M2 681 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 DENND5BQ6ZUT9 1274 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 FKBP9P1Q75LS8 142 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 LENG1Q96BZ8 264 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SEMA6AQ9H2E6 1030 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 SIGLEC1Q9BZZ2 1709 aa12.83□□□□□ -0.36
CSPG4P13-202ENST00000567704 CLOCKO15516 846 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 EXTL3O43909 919 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 MT-CO1P00395 513 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 PPATQ06203 517 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 BOLA3Q53S33 107 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 TBCELQ5QJ74 424 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 MFSD7Q6UXD7 560 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 MCOLN2Q8IZK6 566 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 TAGAPQ8N103 731 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZCCHC9Q8N567 271 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAM193BQ96PV7 902 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 HSD3B7Q9H2F3 369 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms