RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 BPIFB1Q8TDL5 484 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 MS4A7Q9GZW8 240 aaPredicted RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 FOXP1Q9H334 677 aaPredicted RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 GBA2Q9HCG7 927 aaPredicted RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 TCRBV5S1A1TA0A578 114 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 FGAP02671 866 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 A1BGP04217 495 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 PF4V1P10720 104 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 PHKG2P15735 406 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 KCNA3P22001 575 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 PRKAR1BP31321 381 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 WNT3P56703 355 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 ZIK1Q3SY52 487 aaPredicted RBP4.11□□□□□ -1.75
CDH1-211ENST00000567320 CRELD2Q6UXH1 353 aaPredicted RBP4.11□□□□□ -1.75
CDH1-211ENST00000567320 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 BCDIN3DQ7Z5W3 292 aaKnown RBP4.11□□□□□ -1.75
CDH1-211ENST00000567320 DAAM2Q86T65 1068 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 ADAMTS15Q8TE58 950 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 HPS3Q969F9 1004 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 HS6ST2Q96MM7 605 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 HOMER2Q9NSB8 354 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 LPAR3Q9UBY5 353 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 MED16Q9Y2X0 877 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 COL4A3BPQ9Y5P4 624 aa4.11□□□□□ -1.75
CDH1-211ENST00000567320 A0A1W2PPL8 197 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 BTBD19C9JJ37 291 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 H3BNX3 289 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 AP1G1O43747 822 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 PRF1P14222 555 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 MTHFSP49914 203 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 RAB1AP62820 205 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 PSG6Q00889 435 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 CTBP1Q13363 440 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 ZNF267Q14586 743 aaPredicted RBP4.1□□□□□ -1.75
CDH1-211ENST00000567320 PTCHD3Q3KNS1 767 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 AWAT1Q58HT5 328 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 CC2D1BQ5T0F9 858 aaKnown RBP4.1□□□□□ -1.75
CDH1-211ENST00000567320 DENND2CQ68D51 928 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 SFTPA1Q8IWL2 248 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 OR6B3Q8NGW1 331 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 PLBD2Q8NHP8 589 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 C1GALT1C1Q96EU7 318 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 POT1Q9NUX5 634 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 USP22Q9UPT9 525 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 ANKRD6Q9Y2G4 727 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 SQORQ9Y6N5 450 aa4.1□□□□□ -1.75
CDH1-211ENST00000567320 CCDC187A0A096LP49 1063 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 BTN3A1O00481 513 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 RGS10O43665 173 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 PMPCBO75439 489 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 RASAL1O95294 804 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 MT-CO3P00414 261 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 HOXD9P28356 352 aaPredicted RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 GKP32189 559 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 CCKARP32238 428 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 SLC13A2Q13183 592 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 CCNIQ14094 377 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 TRIM71Q2Q1W2 868 aaKnown RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 C4orf46Q504U0 113 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 BRDTQ58F21 947 aaPredicted RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 CERCAMQ5T4B2 595 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 MEX3CQ5U5Q3 659 aaKnown RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 COQ8BQ96D53 544 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 MRGPRX1Q96LB2 322 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 NUP88Q99567 741 aaPredicted RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 SNX15Q9NRS6 342 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 TMEM184CQ9NVA4 438 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 ASIC5Q9NY37 505 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 WWOXQ9NZC7 414 aa4.09□□□□□ -1.75
CDH1-211ENST00000567320 DRG1Q9Y295 367 aaKnown RBP4.09□□□□□ -1.75
CDH1-211ENST00000567320 KITP10721 976 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 CREB1P16220 341 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 NCLP19338 710 aaKnown RBP4.08□□□□□ -1.76
CDH1-211ENST00000567320 HTR1BP28222 390 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 LINC00205P59089 165 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 LMAN2Q12907 356 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 RAB32Q13637 225 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 ATAT1Q5SQI0 421 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 CACHD1Q5VU97 1274 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 KIAA1161Q6NSJ0 714 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 PTCHD4Q6ZW05 846 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 GAS2L3Q86XJ1 694 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 DNAJB14Q8TBM8 379 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 MAP4K1Q92918 833 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 RSPRY1Q96DX4 576 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 ZC3H10Q96K80 434 aaKnown RBP4.08□□□□□ -1.76
CDH1-211ENST00000567320 LRGUKQ96M69 825 aa4.08□□□□□ -1.76
CDH1-211ENST00000567320 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.08□□□□□ -1.76
CDH1-211ENST00000567320 A0A087WWL8 130 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 A0A088AWK7 358 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 FAM90A10PA6NDY2 464 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 CD8B2A6NJW9 211 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms