RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 DDX43Q9NXZ2 648 aaKnown RBP18.02■□□□□ 0.48
CDH3-205ENST00000566808 CABIN1Q9Y6J0 2220 aa18.02■□□□□ 0.47
CDH3-205ENST00000566808 K7ENM7 598 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 LAD1O00515 517 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 C1QL1O75973 258 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 PRB1P04280 392 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 HOXB2P14652 356 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 SLC7A9P82251 487 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 SYCP2LQ5T4T6 812 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 SLC39A4Q6P5W5 647 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 SCN4BQ8IWT1 228 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 PHTF2Q8N3S3 785 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 ZNF513Q8N8E2 541 aaPredicted RBP18.01■□□□□ 0.47
CDH3-205ENST00000566808 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 CRELD1Q96HD1 420 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 CEP295NLQ96MC4 621 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 ODF2LQ9ULJ1 636 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
CDH3-205ENST00000566808 KNL1Q8NG31 2342 aa18■□□□□ 0.47
CDH3-205ENST00000566808 ZBTB24O43167 697 aaPredicted RBP18■□□□□ 0.47
CDH3-205ENST00000566808 ACAT1P24752 427 aaKnown RBP18■□□□□ 0.47
CDH3-205ENST00000566808 MAGEA11P43364 429 aa18■□□□□ 0.47
CDH3-205ENST00000566808 ABCG1P45844 678 aa18■□□□□ 0.47
CDH3-205ENST00000566808 ACOT2P49753 483 aa18■□□□□ 0.47
CDH3-205ENST00000566808 SLC12A3P55017 1021 aa18■□□□□ 0.47
CDH3-205ENST00000566808 POU5F1Q01860 360 aaKnown RBP18■□□□□ 0.47
CDH3-205ENST00000566808 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
CDH3-205ENST00000566808 PREPLQ4J6C6 727 aaPredicted RBP18■□□□□ 0.47
CDH3-205ENST00000566808 HYIQ5T013 277 aa18■□□□□ 0.47
CDH3-205ENST00000566808 RHBDF2Q6PJF5 856 aa18■□□□□ 0.47
CDH3-205ENST00000566808 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
CDH3-205ENST00000566808 RGL4Q8IZJ4 473 aa18■□□□□ 0.47
CDH3-205ENST00000566808 SLC39A7Q92504 469 aa18■□□□□ 0.47
CDH3-205ENST00000566808 C8orf76Q96K31 380 aa18■□□□□ 0.47
CDH3-205ENST00000566808 TRPM5Q9NZQ8 1165 aa18■□□□□ 0.47
CDH3-205ENST00000566808 GTF3C4Q9UKN8 822 aa18■□□□□ 0.47
CDH3-205ENST00000566808 CPQQ9Y646 472 aa18■□□□□ 0.47
CDH3-205ENST00000566808 KNTC1P50748 2209 aa18■□□□□ 0.47
CDH3-205ENST00000566808 MUC22E2RYF6 1773 aaPredicted RBP17.99■□□□□ 0.47
CDH3-205ENST00000566808 ATMQ13315 3056 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 ATXN7O15265 892 aaPredicted RBP17.99■□□□□ 0.47
CDH3-205ENST00000566808 HUS1O60921 280 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 DKK1O94907 266 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 OLFM2O95897 454 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 ZNF883P0CG24 379 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 PLA2G2AP14555 144 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 ABCD1P33897 745 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 PRPHP41219 470 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 CYP4F3Q08477 520 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
CDH3-205ENST00000566808 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 WDR45BQ5MNZ6 344 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDH3-205ENST00000566808 GALNT15Q8N3T1 639 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 FOXJ1Q92949 421 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 ZNF419Q96HQ0 510 aaPredicted RBP17.99■□□□□ 0.47
CDH3-205ENST00000566808 SPATA17Q96L03 361 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 PNMA5Q96PV4 448 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 CYP8B1Q9UNU6 501 aa17.99■□□□□ 0.47
CDH3-205ENST00000566808 NPHP3-ACAD11A0A0J9YXS1 232 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 SCAMP3O14828 347 aaKnown RBP17.98■□□□□ 0.47
CDH3-205ENST00000566808 NDUFV2P19404 249 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 PCSK1P29120 753 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 NTSR1P30989 418 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 ADALQ6DHV7 355 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 C4orf50Q6ZRC1 276 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 NUDT18Q6ZVK8 323 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 ETFBKMTQ8IXQ9 262 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 BAHD1Q8TBE0 780 aaPredicted RBP17.98■□□□□ 0.47
CDH3-205ENST00000566808 SETD7Q8WTS6 366 aaKnown RBP17.98■□□□□ 0.47
CDH3-205ENST00000566808 TTLL2Q9BWV7 592 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 SMPD4Q9NXE4 827 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 TOR4AQ9NXH8 423 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 CFAP97Q9P2B7 532 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 TBC1D14Q9P2M4 693 aa17.98■□□□□ 0.47
CDH3-205ENST00000566808 COL6A6A6NMZ7 2263 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 MGAQ8IWI9 3026 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 A0A1W2PQF6 199 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 TBC1D3BA6NDS4 549 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 NDUFS2O75306 463 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 IL18RAPO95256 599 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 CER1O95813 267 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 PPP3CCP48454 512 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 ANAPC15P60006 121 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 VSTM1Q6UX27 236 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 DENND5BQ6ZUT9 1274 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 ADGRF2Q8IZF7 708 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 TERB1Q8NA31 727 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 OTUB2Q96DC9 234 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 CDC6Q99741 560 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 REEP2Q9BRK0 252 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 AGO2Q9UKV8 859 aaKnown RBP17.97■□□□□ 0.47
CDH3-205ENST00000566808 NFE2L3Q9Y4A8 694 aa17.97■□□□□ 0.47
CDH3-205ENST00000566808 A0A1B0GTW7 788 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 ZNF840PA6NDX5 716 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 TRABD2BA6NFA1 517 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms