RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 HOOK1Q9UJC3 728 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 TRAF3IP3Q9Y228 551 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 ZFHX2Q9C0A1 2572 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 TRIM49BA6NDI0 452 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 BIN1O00499 593 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 C4BPAP04003 597 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 USP17L7P0C7H9 530 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 SP9P0CG40 484 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 ARSAP15289 507 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 DDX6P26196 483 aaKnown RBP eCLIP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 CTHP32929 405 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 PSMC2P35998 433 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 IFNAR2P48551 515 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 NDST1P52848 882 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 PPP3CAQ08209 521 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 FCHO2Q0JRZ9 810 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 MTAPQ13126 283 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 ITPRIPL2Q3MIP1 535 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 ZACNQ401N2 412 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 VSTM1Q6UX27 236 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 INTS8Q75QN2 995 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 ASCL5Q7RTU5 278 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 LIMS2Q7Z4I7 341 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 MON1AQ86VX9 555 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 CCDC150Q8NCX0 1101 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 TAS1R2Q8TE23 839 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 TRMT2BQ96GJ1 504 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 LMAN1LQ9HAT1 526 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 GKN1Q9NS71 199 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 TRPM5Q9NZQ8 1165 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 WNT6Q9Y6F9 365 aa10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 RIF1Q5UIP0 2472 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-206ENST00000566779 SPAG17Q6Q759 2223 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 PTPRZ1P23471 2315 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 PRR23AA6NEV1 266 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 CETN3O15182 167 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 GADD45BO75293 160 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 STAU1O95793 577 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 TRIM21P19474 475 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 NBL1P41271 181 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 PRCPP42785 496 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 ASPAP45381 313 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 MXI1P50539 228 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 TAF10Q12962 218 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 STIM1Q13586 685 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 LRRC32Q14392 662 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 MTF1Q14872 753 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 SGSM1Q2NKQ1 1148 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 ZNF394Q53GI3 561 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 ZNF658Q5TYW1 1059 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 ZC3H14Q6PJT7 736 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 TXNDC11Q6PKC3 985 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 Q6ZS52 159 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 RIN3Q8TB24 985 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 SLC2A14Q8TDB8 520 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 SH3RF2Q8TEC5 729 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 FBXO32Q969P5 355 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 TNIP3Q96KP6 325 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 SLITRK1Q96PX8 696 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 KCNK16Q96T55 309 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 NELL2Q99435 816 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 NACA2Q9H009 215 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 KIF9Q9HAQ2 790 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 DMAP1Q9NPF5 467 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 TMEM30AQ9NV96 361 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 DUS2Q9NX74 493 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 OBP2AQ9NY56 170 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 VPS9D1Q9Y2B5 631 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 PCDHA5Q9Y5H7 936 aa10.74□□□□□ -0.69
GTF3C1-206ENST00000566779 ARNTLO00327 626 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 ASS1P00966 412 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 MBL2P11226 248 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 HDCP19113 662 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 YWHAQP27348 245 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 MAP3K7CLP57077 242 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 CCDC40Q4G0X9 1142 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 HEATR6Q6AI08 1181 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 ADSSL1Q8N142 457 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 SMARCD1Q96GM5 515 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 SPATA17Q96L03 361 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 OSBPL6Q9BZF3 934 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 NIF3L1Q9GZT8 377 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 C8orf33Q9H7E9 229 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 APOBEC3GQ9HC16 384 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 HPS4Q9NQG7 708 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 EHD2Q9NZN4 543 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 ZMYM5Q9UJ78 669 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 CTNND2Q9UQB3 1225 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 CPQQ9Y646 472 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 EML5Q05BV3 1969 aa10.73□□□□□ -0.69
GTF3C1-206ENST00000566779 SHISA7A6NL88 538 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 POM121CA8CG34 1229 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 PSMA7O14818 248 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 IKBKBO14920 756 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM200BP0CF97 657 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 IRF1P10914 325 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 MAGEA9P43362 315 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 SLC5A3P53794 718 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms