RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 PCDHGA5Q9Y5G8 931 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 CPQQ9Y646 472 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 KMT2BQ9UMN6 2715 aaPredicted RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 TAF10Q12962 218 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 CUL4BQ13620 913 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 TCEAL6Q6IPX3 200 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 SFTPA1Q8IWL2 248 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 ADGRG2Q8IZP9 1017 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 C12orf50Q8NA57 414 aaPredicted RBP20.04■□□□□ 0.8
ABCA3-204ENST00000566200 B3GALNT2Q8NCR0 500 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 TCEAL3Q969E4 200 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 ELMO3Q96BJ8 720 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 ELOVL4Q9GZR5 314 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 SMPD4Q9NXE4 827 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 NXF1Q9UBU9 619 aaKnown RBP20.04■□□□□ 0.8
ABCA3-204ENST00000566200 LAMA1P25391 3075 aa20.04■□□□□ 0.8
ABCA3-204ENST00000566200 MYOFQ9NZM1 2061 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 PPP3CCP48454 512 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 SEC13P55735 322 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 TNNC1P63316 161 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 FOXD4L6Q3SYB3 417 aaPredicted RBP20.03■□□□□ 0.8
ABCA3-204ENST00000566200 C2orf27AQ580R0 203 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 STPG1Q5TH74 334 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 FOXD4L3Q6VB84 417 aaPredicted RBP20.03■□□□□ 0.8
ABCA3-204ENST00000566200 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 SMYD3Q9H7B4 428 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 EHD2Q9NZN4 543 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 PCDHA7Q9UN72 937 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 INVSQ9Y283 1065 aa20.03■□□□□ 0.8
ABCA3-204ENST00000566200 NUP205Q92621 2012 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.02■□□□□ 0.8
ABCA3-204ENST00000566200 A8MXQ7 604 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 ABL1P00519 1130 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 HNRNPLP14866 589 aaKnown RBP eCLIP20.02■□□□□ 0.8
ABCA3-204ENST00000566200 ATICP31939 592 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 AFMP43652 599 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 SLC6A11P48066 632 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 CDH8P55286 799 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 DHCR24Q15392 516 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 KNOP1Q1ED39 458 aaKnown RBP20.02■□□□□ 0.8
ABCA3-204ENST00000566200 TDRD10Q5VZ19 366 aaKnown RBP20.02■□□□□ 0.8
ABCA3-204ENST00000566200 IL31Q6EBC2 164 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 RASSF3Q86WH2 238 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 C12orf40Q86WS4 652 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 KIAA1958Q8N8K9 716 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 KCNK16Q96T55 309 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 TPSD1Q9BZJ3 242 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 SDCBP2Q9H190 292 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 VRTNQ9H8Y1 702 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 VPS45Q9NRW7 570 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 CFAP97Q9P2B7 532 aa20.02■□□□□ 0.8
ABCA3-204ENST00000566200 PVALEFA0A1B0GWK0 134 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 KLRC4O43908 158 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 KRT37O76014 449 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 DGKEP52429 567 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 CLDN10P78369 228 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 IFRD2Q12894 506 aaPredicted RBP20.01■□□□□ 0.79
ABCA3-204ENST00000566200 TRPC3Q13507 836 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 RESP18Q5W5W9 173 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 RHBDF2Q6PJF5 856 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 NUP93Q8N1F7 819 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 CCDC33Q8N5R6 958 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 TSTD1Q8NFU3 115 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 ZFRQ96KR1 1074 aaKnown RBP20.01■□□□□ 0.79
ABCA3-204ENST00000566200 MMP17Q9ULZ9 603 aa20.01■□□□□ 0.79
ABCA3-204ENST00000566200 BCLAF3A2AJT9 711 aaKnown RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 LRRIQ3A6PVS8 624 aaPredicted RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 TNFRSF10BO14763 440 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 EXOC3O60645 756 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 VNN1O95497 513 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 F13A1P00488 732 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 ZSCAN22P10073 491 aaPredicted RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 KCNA4P22459 653 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 ELF2Q15723 593 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 TMEM92Q6UXU6 159 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 FAM35AQ86V20 835 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 KIAA0895Q8NCT3 520 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 SCAMP5Q8TAC9 235 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 PARD3BQ8TEW8 1205 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 DDX1Q92499 740 aaKnown RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 SNX21Q969T3 373 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 SLITRK1Q96PX8 696 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 DMAC2Q9NW81 257 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 IL37Q9NZH6 218 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 CGNQ9P2M7 1197 aaKnown RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 EPG5Q9HCE0 2579 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 ACACBO00763 2458 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 ABCA7Q8IZY2 2146 aa20■□□□□ 0.79
ABCA3-204ENST00000566200 TPRP12270 2363 aaKnown RBP20■□□□□ 0.79
ABCA3-204ENST00000566200 THADAQ6YHU6 1953 aa19.99■□□□□ 0.79
ABCA3-204ENST00000566200 COCHO43405 550 aa19.99■□□□□ 0.79
ABCA3-204ENST00000566200 C4BPAP04003 597 aaKnown RBP19.99■□□□□ 0.79
ABCA3-204ENST00000566200 MBL2P11226 248 aaPredicted RBP19.99■□□□□ 0.79
ABCA3-204ENST00000566200 BCKDHBP21953 392 aa19.99■□□□□ 0.79
ABCA3-204ENST00000566200 YWHAQP27348 245 aa19.99■□□□□ 0.79
ABCA3-204ENST00000566200 CREB5Q02930 508 aa19.99■□□□□ 0.79
ABCA3-204ENST00000566200 STK4Q13043 487 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms