RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 KCNA1Q09470 495 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 ITGA7Q13683 1181 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 SPDYE7PQ495Y7 208 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 TMCO4Q5TGY1 634 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 NUGGCQ68CJ6 796 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 DCLRE1AQ6PJP8 1040 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 PRUNE1Q86TP1 453 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 C18orf25Q96B23 403 aaPredicted RBP6.77□□□□□ -1.33
LINC01043-201ENST00000565936 PRPF18Q99633 342 aaKnown RBP6.77□□□□□ -1.33
LINC01043-201ENST00000565936 NFKBIZQ9BYH8 718 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC01043-201ENST00000565936 LNPEPQ9UIQ6 1025 aa6.77□□□□□ -1.33
LINC01043-201ENST00000565936 LACTBL1A8MY62 500 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NCK2O43639 380 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FGBP02675 491 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CHRM3P20309 590 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 GRK3P35626 688 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ZNF200P98182 395 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 TGM3Q08188 693 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NCAPHQ15003 741 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ACAP1Q15027 740 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ZNF438Q7Z4V0 828 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FAM172AQ8WUF8 416 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SLC28A3Q9HAS3 691 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ABCC13Q9NSE7 274 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 STX18Q9P2W9 335 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 TRMT6Q9UJA5 497 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 TRAF3IP3Q9Y228 551 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ALG6Q9Y672 507 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FRMD3A2A2Y4 597 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 GOLGA8TH3BQL2 631 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CCDC22O60826 627 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RHOBTB1O94844 696 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 IGSF6O95976 241 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CYP2C18P33260 490 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ANXA11P50995 505 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 GCNT1Q02742 428 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 PEX6Q13608 980 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CENPPQ6IPU0 288 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NLGN2Q8NFZ4 835 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CD99L2Q8TCZ2 262 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RSPH1Q8WYR4 309 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 UBE2OQ9C0C9 1292 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NDEL1Q9GZM8 345 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ANGPTL2Q9UKU9 493 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CDH9Q9ULB4 789 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ZNF510Q9Y2H8 683 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NEU2Q9Y3R4 380 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RECQL4O94761 1208 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 POLR2EP19388 210 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RIBC1Q8N443 379 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SPG21Q9NZD8 308 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 PPARGC1AQ9UBK2 798 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 DERAQ9Y315 318 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ROBO1Q9Y6N7 1651 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 LTBP3Q9NS15 1303 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CFLARO15519 480 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 NDST1P52848 882 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RTP1P59025 263 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FSTL1Q12841 308 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 ZSCAN26Q16670 478 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SLC39A12Q504Y0 691 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 TFDP3Q5H9I0 405 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 IRAK1BP1Q5VVH5 260 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SV2AQ7L0J3 742 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 BTBD6Q96KE9 485 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SLC13A1Q9BZW2 595 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 AGPAT5Q9NUQ2 364 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RIC8BQ9NVN3 520 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 G3BP2Q9UN86 482 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 AP4E1Q9UPM8 1137 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 RPTORQ8N122 1335 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FAM208AQ9UK61 1670 aaKnown RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FNTAP49354 379 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 CTCFP49711 727 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 PRAMEF19Q5SWL8 479 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FAM9CQ8IZT9 166 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 VPS37AQ8NEZ2 397 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 SENP8Q96LD8 212 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 FAM167BQ9BTA0 163 aa6.76□□□□□ -1.33
LINC01043-201ENST00000565936 PDGFDQ9GZP0 370 aaPredicted RBP6.76□□□□□ -1.33
LINC01043-201ENST00000565936 OR6C75A6NL08 312 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 C5orf58C9J3I9 102 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RBAK-RBAKDNI3L0D1 243 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 IFRD1O00458 451 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RAMP2O60895 175 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CLASP2O75122 1294 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 VPS26AO75436 327 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PCDH8O95206 1070 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TGM2P21980 687 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ATP5C1P36542 298 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 LIG3P49916 1009 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 APLP1P51693 650 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ITGA9Q13797 1035 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms