RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TWNKQ96RR1 684 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 SRRTQ9BXP5 876 aaKnown RBP21.04■□□□□ 0.96
CMTM3-211ENST00000565922 SMG9Q9H0W8 520 aaKnown RBP21.04■□□□□ 0.96
CMTM3-211ENST00000565922 FBXO44Q9H4M3 255 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 PNPLA8Q9NP80 782 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 DACH1Q9UI36 760 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 COL4A3Q01955 1670 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 ZNF840PA6NDX5 716 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 FAM170BA6NMN3 283 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 LRRN2O75325 713 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 DCNP07585 359 aaKnown RBP21.03■□□□□ 0.96
CMTM3-211ENST00000565922 ADORA2BP29275 332 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 CUL2Q13617 745 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 TRIM59Q8IWR1 403 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 WHAMMQ8TF30 809 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 FAM3CQ92520 227 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 NT5C1BQ96P26 610 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 LRRC3BQ96PB8 259 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 GCNT4Q9P109 453 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 ARHGAP26Q9UNA1 814 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 CCL26Q9Y258 94 aa21.03■□□□□ 0.96
CMTM3-211ENST00000565922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.03■□□□□ 0.96
CMTM3-211ENST00000565922 F5P12259 2224 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 C2orf78A6NCI8 922 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 ABL1P00519 1130 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 TCF3P15923 654 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 MAP3K7CLP57077 242 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 MTF1Q14872 753 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 PDGFRLQ15198 375 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 ZNF394Q53GI3 561 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 RALGPS2Q86X27 583 aaPredicted RBP21.02■□□□□ 0.96
CMTM3-211ENST00000565922 ARL14EPQ8N8R7 260 aaPredicted RBP21.02■□□□□ 0.96
CMTM3-211ENST00000565922 TATDN2Q93075 761 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 TMEM176AQ96HP8 235 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 HEXIM2Q96MH2 286 aaKnown RBP21.02■□□□□ 0.96
CMTM3-211ENST00000565922 SMOQ99835 787 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 LMBRD1Q9NUN5 540 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 IL37Q9NZH6 218 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 DLGAP2Q9P1A6 1054 aa21.02■□□□□ 0.96
CMTM3-211ENST00000565922 WDFY4Q6ZS81 3184 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 TNFRSF10BO14763 440 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 AFPP02771 609 aaKnown RBP21.01■□□□□ 0.95
CMTM3-211ENST00000565922 CD72P21854 359 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 TARSP26639 723 aaKnown RBP21.01■□□□□ 0.95
CMTM3-211ENST00000565922 RPS9P46781 194 aaKnown RBP21.01■□□□□ 0.95
CMTM3-211ENST00000565922 SLC8A3P57103 927 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 AMPD2Q01433 879 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 KCNH2Q12809 1159 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 USP4Q13107 963 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 ZNF77Q15935 545 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 TPD52L1Q16890 204 aaPredicted RBP21.01■□□□□ 0.95
CMTM3-211ENST00000565922 ITPRIPL2Q3MIP1 535 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 CLEC20AQ6ZU45 233 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 KIAA1958Q8N8K9 716 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 ZMIZ2Q8NF64 920 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 ZFYVE19Q96K21 471 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 CYP2S1Q96SQ9 504 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 ARID3AQ99856 593 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 IER2Q9BTL4 223 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 GKN1Q9NS71 199 aa21.01■□□□□ 0.95
CMTM3-211ENST00000565922 FAM92AA1XBS5 289 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 OLFM2O95897 454 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 TUBP50607 506 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 RAD23BP54727 409 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 SLC7A9P82251 487 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 ANGPT1Q15389 498 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 SNX30Q5VWJ9 437 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 DDX42Q86XP3 938 aaKnown RBP eCLIP21■□□□□ 0.95
CMTM3-211ENST00000565922 ATOH1Q92858 354 aaPredicted RBP21■□□□□ 0.95
CMTM3-211ENST00000565922 EXOC4Q96A65 974 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 CLDN23Q96B33 292 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 SLC22A12Q96S37 553 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 FAM83CQ9BQN1 747 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
CMTM3-211ENST00000565922 NDRG2Q9UN36 371 aaKnown RBP21■□□□□ 0.95
CMTM3-211ENST00000565922 SPECC1L-ADORA2AF8WAN1 911 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 H0Y858 1186 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 BEST1O76090 585 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 OAS1P00973 400 aaKnown RBP20.99■□□□□ 0.95
CMTM3-211ENST00000565922 CTHP32929 405 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 IFNAR2P48551 515 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 RUNX3Q13761 415 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 PPP1R26Q5T8A7 1209 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-211ENST00000565922 ARHGAP17Q68EM7 881 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 SLC4A11Q8NBS3 891 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 SCAMP5Q8TAC9 235 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 SH3RF2Q8TEC5 729 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 OSCP1Q8WVF1 389 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 DUSP16Q9BY84 665 aa20.99■□□□□ 0.95
CMTM3-211ENST00000565922 TLR8Q9NR97 1041 aaKnown RBP20.99■□□□□ 0.95
CMTM3-211ENST00000565922 LRMPQ12912 555 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 LRRC32Q14392 662 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 SGO2Q562F6 1265 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 CT47A1Q5JQC4 288 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-211ENST00000565922 HECTD3Q5T447 861 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 C1orf210Q8IVY1 113 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 FAM114A1Q8IWE2 563 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 PPM1KQ8N3J5 372 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 CPA6Q8N4T0 437 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 TTC16Q8NEE8 873 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms