RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 LINC00597Q9H2U6 94 aa18.53■□□□□ 0.56
MAP1LC3B-207ENST00000565788 GOLPH3LQ9H4A5 285 aa18.53■□□□□ 0.56
MAP1LC3B-207ENST00000565788 PARD6AQ9NPB6 346 aa18.53■□□□□ 0.56
MAP1LC3B-207ENST00000565788 POLR3BQ9NW08 1133 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3B-207ENST00000565788 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
MAP1LC3B-207ENST00000565788 CALUO43852 315 aaPredicted RBP18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 OLFM2O95897 454 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 OAS1P00973 400 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 DRD1P21728 446 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 HOXA6P31267 233 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 CNR2P34972 360 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 PPP3CCP48454 512 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 SLC7A9P82251 487 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 SPOPLQ6IQ16 392 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 PAQR9Q6ZVX9 377 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 SV2AQ7L0J3 742 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 NUP93Q8N1F7 819 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 EZH1Q92800 747 aaPredicted RBP18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 CD101Q93033 1021 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 TNIP3Q96KP6 325 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 SLITRK1Q96PX8 696 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 KCNK16Q96T55 309 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 MED10Q9BTT4 135 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 USP18Q9UMW8 372 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 FRMD4BQ9Y2L6 1034 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 CPQQ9Y646 472 aa18.52■□□□□ 0.56
MAP1LC3B-207ENST00000565788 ATP8B3O60423 1300 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 A0A1W2PQ27 194 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 A0A1W2PQ64 194 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 A0A1W2PQD8 194 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 PXNP49023 591 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SPEM2Q0P670 501 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ORC1Q13415 861 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 PUM1Q14671 1186 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 17
MAP1LC3B-207ENST00000565788 RSPO4Q2I0M5 234 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SGSM1Q2NKQ1 1148 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 KRBA2Q6ZNG9 492 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 CCDC47Q96A33 483 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SCAND2PQ9GZW5 306 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 GDPD2Q9HCC8 539 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SMPD4Q9NXE4 827 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 DLL3Q9NYJ7 618 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 HMGXB4Q9UGU5 601 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SLC8A2Q9UPR5 921 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 MAPK8IP1Q9UQF2 711 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 MYH10P35580 1976 aa18.51■□□□□ 0.55
MAP1LC3B-207ENST00000565788 EML5Q05BV3 1969 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ATG13O75143 517 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 RTN3O95197 1032 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 KIF20AO95235 890 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 NFATC1O95644 943 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ASS1P00966 412 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 HLA-DRAP01903 254 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 RETP07949 1114 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 P4HA1P13674 534 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 NR2F2P24468 414 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 YWHAQP27348 245 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 PIK3CAP42336 1068 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SLC5A3P53794 718 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 NR1H3Q13133 447 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 NFIL3Q16649 462 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 FBXO43Q4G163 708 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 DGLUCYQ7Z3D6 616 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ACOT1Q86TX2 421 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 FUKQ8N0W3 1084 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SCAMP5Q8TAC9 235 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 FBXO32Q969P5 355 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 EXOC4Q96A65 974 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SMARCD1Q96GM5 515 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.5■□□□□ 0.558e-8■■■■□ 25.6
MAP1LC3B-207ENST00000565788 ATP6V1DQ9Y5K8 247 aa18.5■□□□□ 0.55
MAP1LC3B-207ENST00000565788 CACNA1AO00555 2505 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 TNFRSF10BO14763 440 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 SCAMP3O14828 347 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 IKBKBO14920 756 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 MAPK13O15264 365 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 AP1G2O75843 785 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 AKAP3O75969 853 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 TRIM49P0CI25 452 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 TRIM49CP0CI26 452 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 MBL2P11226 248 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 CCDC130P13994 396 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 OPRD1P41143 372 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ASPAP45381 313 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 VAMP7P51809 220 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 NDST1P52848 882 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 GAB4Q2WGN9 574 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 CEP68Q76N32 757 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ZMIZ2Q8NF64 920 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 RPLP0P6Q8NHW5 317 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 OVCA2Q8WZ82 227 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 TAF4BQ92750 862 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 KRT82Q9NSB4 513 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 RALGAPA1Q6GYQ0 2036 aa18.49■□□□□ 0.55
MAP1LC3B-207ENST00000565788 BEST1O76090 585 aa18.48■□□□□ 0.55
MAP1LC3B-207ENST00000565788 ZNF202O95125 648 aa18.48■□□□□ 0.55
MAP1LC3B-207ENST00000565788 CYP17A1P05093 508 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms