RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 COL1A2P08123 1366 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF462Q96JM2 2506 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 SPAARA0A1B0GVQ0 90 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 FRMD3A2A2Y4 597 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 NCAM2O15394 837 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 SLC26A4O43511 780 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 PLS3P13797 630 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 FSTP19883 344 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 HOXA11P31270 313 aaPredicted RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 LIMK1P53667 647 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 CRYBB1P53674 252 aaPredicted RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 PMS1P54277 932 aaKnown RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 PTENP60484 403 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 SEZ6Q53EL9 994 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 ODR4Q5SWX8 454 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 TANGO2Q6ICL3 276 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF852Q6ZMS4 543 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 Q6ZS52 159 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 EPM2AIP1Q7L775 607 aaPredicted RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 HAUS6Q7Z4H7 955 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 CEP57L1Q8IYX8 460 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 CHCHD4Q8N4Q1 142 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 RNF149Q8NC42 400 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 FGF13Q92913 245 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 EEF2KMTQ96G04 330 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 TIGD1Q96MW7 591 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 NTPCRQ9BSD7 190 aaKnown RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 OSBPL6Q9BZF3 934 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 CCDC113Q9H0I3 377 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 TNMDQ9H2S6 317 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 TRIM33Q9UPN9 1127 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 INVSQ9Y283 1065 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 PRG3Q9Y2Y8 225 aaPredicted RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 COL4A3BPQ9Y5P4 624 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 AK5Q9Y6K8 562 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 ANK1P16157 1881 aa6.68□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF638Q14966 1978 aaKnown RBP6.68□□□□□ -1.34
UBFD1-204ENST00000565634 TMEM8BA6NDV4 472 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 LRRIQ4A6NIV6 560 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 K7ESF4 209 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 ABLIM1O14639 778 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 NRP1O14786 923 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 DCLK1O15075 740 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 TGFB1I1O43294 461 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 TGM5O43548 720 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 DKC1O60832 514 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 OFD1O75665 1012 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 GLUD1P00367 558 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 POMCP01189 267 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 GHRHP01286 108 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 DARSP14868 501 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 IGFBP6P24592 240 aaPredicted RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CCNE1P24864 410 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 ADSSP30520 456 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 SOX18P35713 384 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 PRCPP42785 496 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 RPS9P46781 194 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 NCKAP1LP55160 1127 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 MBTD1Q05BQ5 628 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 MORC3Q14149 939 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 TRIP4Q15650 581 aaPredicted RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 Q6ZS46 218 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 C11orf57Q6ZUT1 292 aaPredicted RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 UNC13DQ70J99 1090 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 NELFCDQ8IXH7 590 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CMASQ8NFW8 434 aaPredicted RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 SCFD1Q8WVM8 642 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 PSPC1Q8WXF1 523 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 FAM3CQ92520 227 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 NELL2Q99435 816 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 FUCA2Q9BTY2 467 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 TARS2Q9BW92 718 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 EIF2AQ9BY44 585 aaKnown RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 FAM126AQ9BYI3 521 aaPredicted RBP6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CHRDQ9H2X0 955 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 FZD8Q9H461 694 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 ARHGAP28Q9P2N2 729 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CACNG4Q9UBN1 327 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 USP25Q9UHP3 1055 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CDH7Q9ULB5 785 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 FAN1Q9Y2M0 1017 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 HECTD1Q9ULT8 2610 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 CITO14578 2027 aa6.67□□□□□ -1.34
UBFD1-204ENST00000565634 USP9XQ93008 2570 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 KNTC1P50748 2209 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 DOPEY2Q9Y3R5 2298 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 VWA8A3KMH1 1905 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 FREM2Q5SZK8 3169 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SCN1AP35498 2009 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 A0A0U1RQF3 1178 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PVALEFA0A1B0GWK0 134 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SYCE3A1L190 88 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms