RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 SPRED2Q7Z698 418 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 TMEM86AQ8N2M4 240 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 CAVIN3Q969G5 261 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 RTP3Q9BQQ7 232 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 MTUS1Q9ULD2 1270 aa19.43■□□□□ 0.7
EDC3-208ENST00000565602 SF3B1O75533 1304 aaKnown RBP eCLIP19.43■□□□□ 0.73e-6■■■■■ 129.4
EDC3-208ENST00000565602 TTI1O43156 1089 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 TYMPP19971 482 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 FGFR3P22607 806 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 LMO2P25791 158 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 GPS2Q13227 327 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 NNTQ13423 1086 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 STILQ15468 1287 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 SND1Q7KZF4 910 aaKnown RBP eCLIP19.42■□□□□ 0.7
EDC3-208ENST00000565602 TAS1R1Q7RTX1 841 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 EIF1ADQ8N9N8 165 aaKnown RBP19.42■□□□□ 0.7
EDC3-208ENST00000565602 IFT81Q8WYA0 676 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 GDAP1L1Q96MZ0 367 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 NFU1Q9UMS0 254 aa19.42■□□□□ 0.7
EDC3-208ENST00000565602 YBX2Q9Y2T7 364 aaKnown RBP19.42■□□□□ 0.7
EDC3-208ENST00000565602 TRAPPC3O43617 180 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 CHRNA3P32297 505 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 PBX2P40425 430 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 ZNF252P-AS1Q0IIN9 211 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 CUL1Q13616 776 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DHX34Q14147 1143 aaKnown RBP19.41■□□□□ 0.7
EDC3-208ENST00000565602 SMC1AQ14683 1233 aaKnown RBP19.41■□□□□ 0.7
EDC3-208ENST00000565602 FAM171A1Q5VUB5 890 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DAB2IPQ5VWQ8 1189 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 PRELID2Q8N945 189 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 OR6B3Q8NGW1 331 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.41■□□□□ 0.7
EDC3-208ENST00000565602 B3GALT6Q96L58 329 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 CPXM1Q96SM3 734 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DPEP3Q9H4B8 488 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 HPCAL4Q9UM19 191 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 USTQ9Y2C2 406 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 PCDHA11Q9Y5I1 949 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 PTPRDP23468 1912 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 SYN3O14994 580 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 GNL1P36915 607 aaPredicted RBP19.41■□□□□ 0.7
EDC3-208ENST00000565602 TAS2R40P59535 323 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DR1Q01658 176 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 PDCLQ13371 301 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 KIAA0319Q5VV43 1072 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 LCLAT1Q6UWP7 414 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 UNC93AQ86WB7 457 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 KATNAL2Q8IYT4 538 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 SPATA18Q8TC71 538 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 C18orf8Q96DM3 657 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 SYNCQ9H7C4 482 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 TJP2Q9UDY2 1190 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 DSEQ9UL01 958 aa19.41■□□□□ 0.7
EDC3-208ENST00000565602 CARNS1A5YM72 827 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 FAM187AA6NFU0 413 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 FSCN2O14926 492 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 ERBB2P04626 1255 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 CA3P07451 260 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 GPD2P43304 727 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 PSMC1P62191 440 aaKnown RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 ELAVL2Q12926 359 aaKnown RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 MRPL58Q14197 206 aaKnown RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 PIGHQ14442 188 aaPredicted RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 SIX1Q15475 284 aaPredicted RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 CYP1B1Q16678 543 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 RTP2Q5QGT7 225 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 XYLT1Q86Y38 959 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 TDHQ8IZJ6 230 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 NIPA2Q8N8Q9 360 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 C12orf50Q8NA57 414 aaPredicted RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 PBX4Q9BYU1 374 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 RAB17Q9H0T7 212 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 AAASQ9NRG9 546 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 DDX43Q9NXZ2 648 aaKnown RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 TSPAN16Q9UKR8 245 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 UTP11Q9Y3A2 253 aaKnown RBP19.4■□□□□ 0.7
EDC3-208ENST00000565602 PCDHB12Q9Y5F1 795 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 CDH23Q9H251 3354 aa19.4■□□□□ 0.7
EDC3-208ENST00000565602 ATG2AQ2TAZ0 1938 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 TCRBV7S2A1N4TA0A589 114 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 GOLGA8SH3BPF8 625 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 PPM1AP35813 382 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 SSR1P43307 286 aaKnown RBP19.39■□□□□ 0.7
EDC3-208ENST00000565602 GABRB2P47870 512 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 LHX1P48742 406 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 OGDHQ02218 1023 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 ZNF268Q14587 947 aaPredicted RBP19.39■□□□□ 0.7
EDC3-208ENST00000565602 ZDHHC14Q8IZN3 488 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 IPO4Q8TEX9 1081 aaKnown RBP19.39■□□□□ 0.7
EDC3-208ENST00000565602 MAIP1Q8WWC4 291 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 MAGOHBQ96A72 148 aaKnown RBP19.39■□□□□ 0.7
EDC3-208ENST00000565602 TMEM169Q96HH4 297 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 RUNDC3BQ96NL0 473 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 C17orf80Q9BSJ5 609 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 SNX25Q9H3E2 840 aa19.39■□□□□ 0.7
EDC3-208ENST00000565602 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.39■□□□□ 0.69
EDC3-208ENST00000565602 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms