RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 MAP3K7CLP57077 242 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 PPP1R26Q5T8A7 1209 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-212ENST00000565517 SNX30Q5VWJ9 437 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.2
COMMD4-212ENST00000565517 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 GPIHBP1Q8IV16 184 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 FLCNQ8NFG4 579 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 DUSP16Q9BY84 665 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 FBXO44Q9H4M3 255 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 TBC1D17Q9HA65 648 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 TRPC7Q9HCX4 862 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
COMMD4-212ENST00000565517 HHLA1C9JL84 531 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 TCF3P15923 654 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 HDCP19113 662 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
COMMD4-212ENST00000565517 VCPP55072 806 aaKnown RBP16.32■□□□□ 0.2
COMMD4-212ENST00000565517 IER5LQ5T953 404 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 SMYD5Q6GMV2 418 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 SASS6Q6UVJ0 657 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 SCAMP5Q8TAC9 235 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 ENOX1Q8TC92 643 aaKnown RBP16.32■□□□□ 0.2
COMMD4-212ENST00000565517 FBXO32Q969P5 355 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 CYP2S1Q96SQ9 504 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 OSBPL6Q9BZF3 934 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
COMMD4-212ENST00000565517 CCL26Q9Y258 94 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
COMMD4-212ENST00000565517 KANSL1LA0AUZ9 987 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 C2orf78A6NCI8 922 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 STK25O00506 426 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 OLFM2O95897 454 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 OAS1P00973 400 aaKnown RBP16.31■□□□□ 0.2
COMMD4-212ENST00000565517 CKMP06732 381 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 PAEPP09466 180 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ZDHHC11BP0C7U3 371 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 VDRP11473 427 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
COMMD4-212ENST00000565517 RFX1P22670 979 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 MAN2A1Q16706 1144 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 SGO2Q562F6 1265 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 GBP6Q6ZN66 633 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 KIAA1958Q8N8K9 716 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-212ENST00000565517 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 NELL2Q99435 816 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 INTS2Q9H0H0 1204 aaKnown RBP16.31■□□□□ 0.2
COMMD4-212ENST00000565517 HEBP1Q9NRV9 189 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 ARHGAP26Q9UNA1 814 aa16.31■□□□□ 0.2
COMMD4-212ENST00000565517 MAN2B1O00754 1011 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 TUBP50607 506 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 SLC8A3P57103 927 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 SLC7A9P82251 487 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-212ENST00000565517 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 ZNF852Q6ZMS4 543 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 CSGALNACT1Q8TDX6 532 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 MSANTD3Q96H12 275 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 C8orf33Q9H7E9 229 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-212ENST00000565517 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-212ENST00000565517 CNTN6Q9UQ52 1028 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 SCML2Q9UQR0 700 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 MRPS17Q9Y2R5 130 aaKnown RBP16.3■□□□□ 0.2
COMMD4-212ENST00000565517 SIT1Q9Y3P8 196 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 F5P12259 2224 aa16.3■□□□□ 0.2
COMMD4-212ENST00000565517 PI15O43692 258 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 ABL1P00519 1130 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
COMMD4-212ENST00000565517 KIF11P52732 1056 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 USP4Q13107 963 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 ZNF77Q15935 545 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 STX1AQ16623 288 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 EXOC3L4Q17RC7 722 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 VWA3BQ502W6 1294 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 HECTD3Q5T447 861 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 CC2D1AQ6P1N0 951 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-212ENST00000565517 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 TPRG1Q6ZUI0 275 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 KAT5Q92993 513 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 TLR8Q9NR97 1041 aaKnown RBP16.29■□□□□ 0.2
COMMD4-212ENST00000565517 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms