RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 IL37Q9NZH6 218 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 HMGXB4Q9UGU5 601 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 MAPK8IP1Q9UQF2 711 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 ZNF292O60281 2723 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 LEFTY2O00292 366 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 HRO43593 1189 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 TRIM49P0CI25 452 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 TRIM49CP0CI26 452 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 AMPD2Q01433 879 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 ENPEPQ07075 957 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 PPP3CAQ08209 521 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 ACOT1Q86TX2 421 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 NUP93Q8N1F7 819 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 EZH1Q92800 747 aaPredicted RBP16.64■□□□□ 0.25
CDH3-204ENST00000565453 ATP2A3Q93084 1043 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 LINC00597Q9H2U6 94 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 NCDNQ9UBB6 729 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
CDH3-204ENST00000565453 FAM92AA1XBS5 289 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 RTN3O95197 1032 aaPredicted RBP16.63■□□□□ 0.25
CDH3-204ENST00000565453 P4HA1P13674 534 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 TGM1P22735 817 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 YWHAQP27348 245 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 PIK3CAP42336 1068 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 NDST1P52848 882 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 ORC1Q13415 861 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 GAB4Q2WGN9 574 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 INTS8Q75QN2 995 aaKnown RBP16.63■□□□□ 0.25
CDH3-204ENST00000565453 LONP2Q86WA8 852 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 UNC93AQ86WB7 457 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 FAM186BQ8IYM0 893 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 FMR1NBQ8N0W7 255 aaPredicted RBP16.63■□□□□ 0.25
CDH3-204ENST00000565453 TTC16Q8NEE8 873 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 ZMIZ2Q8NF64 920 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 OVCA2Q8WZ82 227 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 RMDN1Q96DB5 314 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 SMARCD1Q96GM5 515 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 SLITRK1Q96PX8 696 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 SMOQ99835 787 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 P2RY13Q9BPV8 354 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
CDH3-204ENST00000565453 DMAP1Q9NPF5 467 aaPredicted RBP16.63■□□□□ 0.25
CDH3-204ENST00000565453 CPQQ9Y646 472 aa16.63■□□□□ 0.25
CDH3-204ENST00000565453 RNF40O75150 1001 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 BEST1O76090 585 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 CLSTN1O94985 981 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 CCDC130P13994 396 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 DRD1P21728 446 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 GCLMP48507 274 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 SLC5A3P53794 718 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 INCA1Q0VD86 236 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 IFRD2Q12894 506 aaPredicted RBP16.62■□□□□ 0.25
CDH3-204ENST00000565453 SRSF5Q13243 272 aaKnown RBP16.62■□□□□ 0.25
CDH3-204ENST00000565453 ADAM9Q13443 819 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 SNX30Q5VWJ9 437 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 WDR5BQ86VZ2 330 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 SCAMP5Q8TAC9 235 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 TAS1R2Q8TE23 839 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 CD101Q93033 1021 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 TWNKQ96RR1 684 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 MED10Q9BTT4 135 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 KRT82Q9NSB4 513 aa16.62■□□□□ 0.25
CDH3-204ENST00000565453 AP1G2O75843 785 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 NFATC1O95644 943 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 ABL1P00519 1130 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
CDH3-204ENST00000565453 CNR2P34972 360 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
CDH3-204ENST00000565453 OPRD1P41143 372 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 NR1H3Q13133 447 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 PNOCQ13519 176 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 EDRF1Q3B7T1 1238 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 FBXO43Q4G163 708 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
CDH3-204ENST00000565453 LAIR1Q6GTX8 287 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 SMYD4Q8IYR2 804 aaPredicted RBP16.61■□□□□ 0.25
CDH3-204ENST00000565453 C12orf29Q8N999 325 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 PDZD8Q8NEN9 1154 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 SLC2A14Q8TDB8 520 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
CDH3-204ENST00000565453 PARD6AQ9NPB6 346 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.61■□□□□ 0.25
CDH3-204ENST00000565453 COMMD8Q9NX08 183 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 SMPD4Q9NXE4 827 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 SPTBN4Q9H254 2564 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 KIAA1549LQ6ZVL6 1849 aa16.61■□□□□ 0.25
CDH3-204ENST00000565453 ATG13O75143 517 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 CYP17A1P05093 508 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 KRT13P13646 458 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 SIM2Q14190 667 aaPredicted RBP16.6■□□□□ 0.25
CDH3-204ENST00000565453 LPAL2Q16609 132 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
CDH3-204ENST00000565453 ADGRG2Q8IZP9 1017 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms