RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 OLIG1Q8TAK6 271 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 USP28Q96RU2 1077 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 PNKPQ96T60 521 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 TMEM9BQ9NQ34 198 aa12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 MORC2Q9Y6X9 1032 aaPredicted RBP12.35□□□□□ -0.43
NSMCE1-209ENST00000565384 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TACC1O75410 805 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 KAT7O95251 611 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 APODP05090 189 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 PROS1P07225 676 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 DLATP10515 647 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TNNI1P19237 187 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 SYT1P21579 422 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TIE1P35590 1138 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CACNA2D1P54289 1103 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TNNC1P63316 161 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 UNQ6494/PRO21346Q6UXR6 183 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 PIGKQ92643 395 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 IPO9Q96P70 1041 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 SLITRK1Q96PX8 696 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 ELOVL4Q9GZR5 314 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TNMDQ9H2S6 317 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 CFAP97Q9P2B7 532 aa12.34□□□□□ -0.43
NSMCE1-209ENST00000565384 NUP205Q92621 2012 aa12.33□□□□□ -0.43
NSMCE1-209ENST00000565384 C1QTNF9BB2RNN3 333 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 SGK1O00141 431 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 ADH1CP00326 375 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 ADH5P11766 374 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 HOXD13P35453 343 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 P2RY2P41231 377 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 IRX4P78413 519 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 KDSRQ06136 332 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 SNRNP35Q16560 246 aaKnown RBP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 EOGTQ5NDL2 527 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 RHBDF2Q6PJF5 856 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 SPACA7Q96KW9 195 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 TRIM9Q9C026 710 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 POLMQ9NP87 494 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 ARHGEF4Q9NR80 690 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 BCCIPQ9P287 314 aaKnown RBP eCLIP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-209ENST00000565384 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 THADAQ6YHU6 1953 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 USP24Q9UPU5 2620 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 A8MXQ7 604 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 CLDN5O00501 218 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 TGFB1I1O43294 461 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 CEACAM1P13688 526 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 SPINK2P20155 84 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 GRIA2P42262 883 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 CYP2J2P51589 502 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 ASIC1P78348 528 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 CYP24A1Q07973 514 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 BECN1Q14457 450 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 PSMD6Q15008 389 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 E2F4Q16254 413 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 UAP1L1Q3KQV9 507 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 TRIM61Q5EBN2 209 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 FAM26FQ5R3K3 315 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 LPCAT2Q7L5N7 544 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 EPM2AIP1Q7L775 607 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 TMEFF1Q8IYR6 380 aa12.32□□□□□ -0.44
NSMCE1-209ENST00000565384 NUP93Q8N1F7 819 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms