RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CLDN23Q96B33 292 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 TWNKQ96RR1 684 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 HPS4Q9NQG7 708 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 SMPD4Q9NXE4 827 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 WNT6Q9Y6F9 365 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 EPG5Q9HCE0 2579 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 PPP1R3GB7ZBB8 358 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 YWHAQP27348 245 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 MAGEA9P43362 315 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 MAP3K7CLP57077 242 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 STIM1Q13586 685 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 RUNX3Q13761 415 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 ZNF394Q53GI3 561 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 KRT39Q6A163 491 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 RALGPS2Q86X27 583 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 FUKQ8N0W3 1084 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 NUP93Q8N1F7 819 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 SEMA4DQ92854 862 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 SMARCD1Q96GM5 515 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 DHTKD1Q96HY7 919 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 SLITRK1Q96PX8 696 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 NIF3L1Q9GZT8 377 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 NUP62CLQ9H1M0 184 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 DMAP1Q9NPF5 467 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 DUS2Q9NX74 493 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 EHD2Q9NZN4 543 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 GCNT4Q9P109 453 aa14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 CHORDC1Q9UHD1 332 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-204ENST00000565023 GVINP1Q7Z2Y8 2422 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 PRR23AA6NEV1 266 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 OTOL1A6NHN0 477 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 PSMA7O14818 248 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 BEST1O76090 585 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 MBL2P11226 248 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 CHRNB1P11230 501 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 TRIM21P19474 475 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 RPS9P46781 194 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 SLC5A3P53794 718 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 STX17P56962 302 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 FKBP3Q00688 224 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 LRRC63Q05C16 580 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 ZNF77Q15935 545 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 FOXR2Q6PJQ5 311 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 Q6ZS52 159 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 ZC3H3Q8IXZ2 948 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 SCAMP5Q8TAC9 235 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 SMOQ99835 787 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 FAM83CQ9BQN1 747 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 TTLL2Q9BWV7 592 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 CHRDQ9H2X0 955 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 CTNND2Q9UQB3 1225 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 DMXL1Q9Y485 3027 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 MYOFQ9NZM1 2061 aa14.45□□□□□ -0.1
VPS9D1-204ENST00000565023 ZNF840PA6NDX5 716 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 SOBPA7XYQ1 873 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 PROB1E7EW31 1015 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 RTN3O95197 1032 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 MBD3O95983 291 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 MCCD1P59942 119 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 LRMPQ12912 555 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 USP4Q13107 963 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 LRRC32Q14392 662 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 ZNF268Q14587 947 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CCDC40Q4G0X9 1142 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CBWD6Q4V339 395 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 WDR44Q5JSH3 913 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CBWD3Q5JTY5 395 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CBWD5Q5RIA9 395 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 NAIF1Q69YI7 327 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 UNC93AQ86WB7 457 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 ZNF687Q8N1G0 1237 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 FBXL13Q8NEE6 735 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 ZMIZ2Q8NF64 920 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 TATDN2Q93075 761 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 MSANTD3Q96H12 275 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CEP295NLQ96MC4 621 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 NT5C1AQ9BXI3 368 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 RNF38Q9H0F5 515 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 LINC00597Q9H2U6 94 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CYP3A43Q9HB55 503 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 RAB20Q9NX57 234 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 GMIPQ9P107 970 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 CPQQ9Y646 472 aa14.44□□□□□ -0.1
VPS9D1-204ENST00000565023 LEFTY2O00292 366 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 SLC16A3O15427 465 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 STX10O60499 249 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 GTF2H1P32780 548 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 PDE6CP51160 858 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ZXDBP98169 803 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 SATB1Q01826 763 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ENPEPQ07075 957 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 GAS6Q14393 721 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 PDGFRLQ15198 375 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ZC3H14Q6PJT7 736 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 CPA6Q8N4T0 437 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 NELFBQ8WX92 580 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms