RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NCANO14594 1321 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 CLDN5O00501 218 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 FGF18O76093 207 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 CALB1P05937 261 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 URODP06132 367 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 MYBL1P10243 752 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 MMP8P22894 467 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 GLUD2P49448 558 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 CDR1P51861 262 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 SLC8A3P57103 927 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 GPC5P78333 572 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 KRT17Q04695 432 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PDE4CQ08493 712 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 BST2Q10589 180 aaKnown RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PSMD5Q16401 504 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PRSS55Q6UWB4 352 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 C4orf50Q6ZRC1 276 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PAQR9Q6ZVX9 377 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 ERICH1Q86X53 443 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 SMRP1Q8NCR6 262 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 VN1R2Q8NFZ6 395 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 IPO4Q8TEX9 1081 aaKnown RBP11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PIK3R5Q8WYR1 880 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 ARHGEF26Q96DR7 871 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 SYNCQ9H7C4 482 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 ST7Q9NRC1 585 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 MTRRQ9UBK8 725 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 CYTH4Q9UIA0 394 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 GUCA1BQ9UMX6 200 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 RWDD3Q9Y3V2 267 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 ZNF292O60281 2723 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
SF3B3-205ENST00000564899 MACROD2A1Z1Q3 448 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 BTNL10A8MVZ5 291 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 TULP2O00295 520 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 C2CD2LO14523 706 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 TBC1D4O60343 1298 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 AP1G2O75843 785 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 ABL1P00519 1130 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 CPB1P15086 417 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 NPR3P17342 541 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 RGS7P49802 495 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 NDUFV1P49821 464 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 NAP1L1P55209 391 aaKnown RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 ARPP19P56211 112 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 DSG1Q02413 1049 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 PTPN20Q4JDL3 420 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 RBM23Q86U06 439 aaKnown RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 VPS52Q8N1B4 723 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 FBXL6Q8N531 539 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 KLHL23Q8NBE8 558 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 RFFLQ8WZ73 363 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 CPXM1Q96SM3 734 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 C11orf84Q9BUA3 381 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 DUSP16Q9BY84 665 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 CNOT8Q9UFF9 292 aaKnown RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-205ENST00000564899 PAXBP1Q9Y5B6 917 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 DUSP10Q9Y6W6 482 aa11.69□□□□□ -0.54
SF3B3-205ENST00000564899 A0A0A6YYK5 440 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 H0Y858 1186 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 KIF5CO60282 957 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CYP1A2P05177 515 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 BDNFP23560 247 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 RRM1P23921 792 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 NRIP1P48552 1158 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 MAP3K7CLP57077 242 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CBX2Q14781 532 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 PMF1Q6P1K2 205 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-205ENST00000564899 CLEC20AQ6ZU45 233 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 PHLDB2Q86SQ0 1253 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 RHOT2Q8IXI1 618 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 SPPL3Q8TCT6 385 aa11.68□□□□□ -0.54
SF3B3-205ENST00000564899 STK32AQ8WU08 396 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms