RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 EIF4E1BA6NMX2 242 aaKnown RBP16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 KBTBD13C9JR72 458 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PIK3R2O00459 728 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 MED7O43513 233 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 RFWD3Q6PCD5 774 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 ZBTB10Q96DT7 871 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PRR11Q96HE9 360 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PEBP4Q96S96 227 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 TRIM55Q9BYV6 548 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SAR1AQ9NR31 198 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 ARL8BQ9NVJ2 186 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 LNPEPQ9UIQ6 1025 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SIX4Q9UIU6 781 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 RNF8O76064 485 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 CXCL8P10145 99 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PYGBP11216 843 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 ETV4P43268 484 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 YWHAGP61981 247 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PRKG1Q13976 671 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 MPZL3Q6UWV2 235 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SLC4A11Q8NBS3 891 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 TTC17Q96AE7 1141 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 KCNK13Q9HB14 408 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 PTPRHQ9HD43 1115 aa16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 FBXO6Q9NRD1 293 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-205ENST00000564747 C2orf71A6NGG8 1288 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 LIN7AO14910 233 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 B4GALT4O60513 344 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 FAM155BO75949 473 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 BGNP21810 368 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ABL2P42684 1182 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ZNF200P98182 395 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TMEM132AQ24JP5 1023 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 SH2D5Q6ZV89 423 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 PRPF39Q86UA1 669 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ARMC2Q8NEN0 867 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TRAPPC12Q8WVT3 735 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 CAMKK2Q96RR4 588 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 CADM1Q9BY67 442 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TLE6Q9H808 572 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TEX264Q9Y6I9 313 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 IKBKGQ9Y6K9 419 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 KAT6AQ92794 2004 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 IQANK1A0A1B0GTG1 560 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 INO80B-WBP1J3KQ70 363 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 MICAL2O94851 1124 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 DHRS4L1P0CG22 281 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 NEFHP12036 1026 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 PROZP22891 400 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 CDH6P55285 790 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ROR1Q01973 937 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 GRIK3Q13003 919 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 BLMHQ13867 455 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ATF7IP2Q5U623 682 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TRIM68Q6AZZ1 485 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 C1orf127Q8N9H9 656 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 SLC44A1Q8WWI5 657 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 NLRP4Q96MN2 994 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 INO80BQ9C086 356 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ELOVL4Q9GZR5 314 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 WDR35Q9P2L0 1181 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 CORO1CQ9ULV4 474 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 LRRC42Q9Y546 428 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 MGAMO43451 1857 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 INHBAP08476 426 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 RPS12P25398 132 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 SERPINB3P29508 390 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 PEX19P40855 299 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 NEK3P51956 506 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ARFIP2P53365 341 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 HSDL1Q3SXM5 330 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 FAM102AQ5T9C2 384 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ANGEL2Q5VTE6 544 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TSHZ1Q6ZSZ6 1077 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ENDOVQ8N8Q3 282 aaKnown RBP16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 UBA3Q8TBC4 463 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 MCRS1Q96EZ8 462 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 ANKRD27Q96NW4 1050 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 TMEM120AQ9BXJ8 343 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 RSAD1Q9HA92 442 aa16.15■□□□□ 0.18
GTF3C1-205ENST00000564747 NFICP08651 508 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 CALRP27797 417 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms