RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 YWHAQP27348 245 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 VIPR2P41587 438 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 MFAP3P55082 362 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 GPC5P78333 572 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 FCHO2Q0JRZ9 810 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TAF10Q12962 218 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 SGO2Q562F6 1265 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TXNDC8Q6A555 127 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 LCLAT1Q6UWP7 414 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TTC30AQ86WT1 665 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 DHX40Q8IX18 779 aaKnown RBP18.3■□□□□ 0.52
USB1-209ENST00000564387 MAB21L3Q8N8X9 362 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 DEPDC1BQ8WUY9 529 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TFAP2BQ92481 460 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 SHC3Q92529 594 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 LRRC3BQ96PB8 259 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 SLITRK1Q96PX8 696 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TRPV5Q9NQA5 729 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TRPM5Q9NZQ8 1165 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 USP3Q9Y6I4 520 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 TMEM221A6NGB7 291 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 M0R296 226 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 PRAMEF12O95522 483 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 TCF3P15923 654 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 PSMC3P17980 439 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 KIF11P52732 1056 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 APBA1Q02410 837 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 CNGA2Q16280 664 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 RAB41Q5JT25 222 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 TMEM31Q5JXX7 168 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 GJB7Q6PEY0 223 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 GPRIN1Q7Z2K8 1008 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 RBBP8NLQ8NC74 664 aaPredicted RBP18.29■□□□□ 0.52
USB1-209ENST00000564387 TAB2Q9NYJ8 693 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 TSPAN16Q9UKR8 245 aa18.29■□□□□ 0.52
USB1-209ENST00000564387 MYH10P35580 1976 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 SYCE3A1L190 88 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 C2orf78A6NCI8 922 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 BECN2A8MW95 431 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 ARNTLO00327 626 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 OAS1P00973 400 aaKnown RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 ZNF165P49910 485 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 IQCB1Q15051 598 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 STILQ15468 1287 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 MEA1Q16626 185 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 AOPEPQ8N6M6 819 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 CELF5Q8N6W0 485 aaKnown RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 USP13Q92995 863 aaPredicted RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 SLC22A12Q96S37 553 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 TRMT61BQ9BVS5 477 aaKnown RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 KIF9Q9HAQ2 790 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 PLCB1Q9NQ66 1216 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 TDP1Q9NUW8 608 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 AJAP1Q9UKB5 411 aaPredicted RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.28■□□□□ 0.52
USB1-209ENST00000564387 SCML2Q9UQR0 700 aa18.28■□□□□ 0.52
USB1-209ENST00000564387 KIF26AQ9ULI4 1882 aaPredicted RBP18.28■□□□□ 0.52
USB1-209ENST00000564387 TRAV19A0A0A6YYK7 116 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 XPO1O14980 1071 aaKnown RBP18.27■□□□□ 0.52
USB1-209ENST00000564387 CD19P15391 556 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 AVPR1AP37288 418 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 TUBP50607 506 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 PDE6CP51160 858 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
USB1-209ENST00000564387 BCAT1P54687 386 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 SLC7A9P82251 487 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 ZSCAN23Q3MJ62 389 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 PIGZQ86VD9 579 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 ZNF276Q8N554 614 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 SLC35F5Q8WV83 523 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 FBXO32Q969P5 355 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 CYP2S1Q96SQ9 504 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 LRFN3Q9BTN0 628 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 VPS16Q9H269 839 aa18.27■□□□□ 0.52
USB1-209ENST00000564387 COL4A2P08572 1712 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 CAVIN2O95810 425 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 USP17L7P0C7H9 530 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 SETSIPP0DME0 302 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 HDCP19113 662 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 RFX1P22670 979 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 PGFP49763 221 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 PFKPQ01813 784 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 PDE4CQ08493 712 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 BST2Q10589 180 aaKnown RBP18.26■□□□□ 0.51
USB1-209ENST00000564387 GOLGA7BQ2TAP0 167 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 HFE2Q6ZVN8 426 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 CCDC186Q7Z3E2 898 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 KIAA1958Q8N8K9 716 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 ARL14EPQ8N8R7 260 aaPredicted RBP18.26■□□□□ 0.51
USB1-209ENST00000564387 KCTD13Q8WZ19 329 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 DNASE1L2Q92874 299 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 RNF38Q9H0F5 515 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms