RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 DENND4AQ7Z401 1863 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 CLDN5O00501 218 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 TGM5O43548 720 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 AP1G2O75843 785 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 FTLP02792 175 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 H2AFZP0C0S5 128 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 UNGP13051 313 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 RPL17P18621 184 aaKnown RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 CDH5P33151 784 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 NAA35Q5VZE5 725 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 RSPO2Q6UXX9 243 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 H2AFVQ71UI9 128 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 FAM35AQ86V20 835 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 PALB2Q86YC2 1186 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 SPPL2BQ8TCT7 592 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 CPA5Q8WXQ8 436 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 SECISBP2LQ93073 1101 aaKnown RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 RHOBTB2Q9BYZ6 727 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 MIS12Q9H081 205 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 POMKQ9H5K3 350 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 TMLHEQ9NVH6 421 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-208ENST00000564247 PCDHA13Q9Y5I0 950 aa17.89■□□□□ 0.45
CMTM3-208ENST00000564247 DCXO43602 365 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 PAPLNO95428 1278 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 CCDC175P0C221 793 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 NPR3P17342 541 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 BDNFP23560 247 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ELF1P32519 619 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 GPD2P43304 727 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 NOMO3P69849 1222 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ROR1Q01973 937 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 CENPCQ03188 943 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 PDE4CQ08493 712 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 RAB33AQ14088 237 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 CFAP221Q4G0U5 840 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 PKDCCQ504Y2 493 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 VSTM1Q6UX27 236 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 PAQR9Q6ZVX9 377 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 KIAA1328Q86T90 577 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 TTC30AQ86WT1 665 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ZNF461Q8TAF7 563 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 STK32AQ8WU08 396 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ISCUQ9H1K1 167 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 SYNCQ9H7C4 482 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ABCB6Q9NP58 842 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 KRT82Q9NSB4 513 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 AFF4Q9UHB7 1163 aaKnown RBP17.88■□□□□ 0.45
CMTM3-208ENST00000564247 MAFFQ9ULX9 164 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 ADGRG1Q9Y653 693 aa17.88■□□□□ 0.45
CMTM3-208ENST00000564247 XPO1O14980 1071 aaKnown RBP17.87■□□□□ 0.45
CMTM3-208ENST00000564247 CCP110O43303 1012 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 ZSCAN12O43309 604 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 SPATA31D3P0C874 917 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 GRIK1P39086 918 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 MAGEA11P43364 429 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 TUFMP49411 452 aaKnown RBP17.87■□□□□ 0.45
CMTM3-208ENST00000564247 MAP3K7CLP57077 242 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 CCDC142Q17RM4 750 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 LIN9Q5TKA1 542 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 RNF19BQ6ZMZ0 732 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 SPATA31D4Q6ZUB0 917 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 PHF13Q86YI8 300 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-208ENST00000564247 WDTC1Q8N5D0 677 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 C1orf131Q8NDD1 294 aaKnown RBP17.87■□□□□ 0.45
CMTM3-208ENST00000564247 OLIG1Q8TAK6 271 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 SLC35F5Q8WV83 523 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 TRIM11Q96F44 468 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 VCPIP1Q96JH7 1222 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 PGLYRP2Q96PD5 576 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 DESI2Q9BSY9 194 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 DMAP1Q9NPF5 467 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-208ENST00000564247 ST7Q9NRC1 585 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 ADAM22Q9P0K1 906 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 INTUQ9ULD6 942 aa17.87■□□□□ 0.45
CMTM3-208ENST00000564247 CCDC195A0A1B0GUA6 201 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 WDR27A2RRH5 827 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 MTMR11A4FU01 709 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ZNF263O14978 683 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ADAM12O43184 909 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ABLIM3O94929 683 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 CALB1P05937 261 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 CYP2F1P24903 491 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ACADSBP45954 432 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 CDR1P51861 262 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ADCY1Q08828 1119 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 CLEC20AQ6ZU45 233 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 SCN4BQ8IWT1 228 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ATAD1Q8NBU5 361 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 KREMEN2Q8NCW0 462 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 ACRBPQ8NEB7 543 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 FEZF2Q8TBJ5 459 aa17.86■□□□□ 0.45
CMTM3-208ENST00000564247 IPO4Q8TEX9 1081 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms