RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PNPLA8Q9NP80 782 aa13.62□□□□□ -0.23
SPG7-209ENST00000564047 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
SPG7-209ENST00000564047 ABI2Q9NYB9 513 aaPredicted RBP13.62□□□□□ -0.23
SPG7-209ENST00000564047 ADAM22Q9P0K1 906 aa13.62□□□□□ -0.23
SPG7-209ENST00000564047 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
SPG7-209ENST00000564047 CYTH4Q9UIA0 394 aa13.62□□□□□ -0.23
SPG7-209ENST00000564047 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 TULP2O00295 520 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 LPXNO60711 386 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 BEST1O76090 585 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 VNN2O95498 520 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 CNPP09543 421 aaKnown RBP13.61□□□□□ -0.23
SPG7-209ENST00000564047 ATF2P15336 505 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
SPG7-209ENST00000564047 CYP2F1P24903 491 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 CA8P35219 290 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 ACADSBP45954 432 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 GABRB2P47870 512 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 CACNA2D1P54289 1103 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 GPC5P78333 572 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 KIF5AQ12840 1032 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 PTPN20Q4JDL3 420 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 PMF1Q6P1K2 205 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 MMS22LQ6ZRQ5 1243 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 TMEM110Q86TL2 294 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 ZMIZ2Q8NF64 920 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
SPG7-209ENST00000564047 ARNTL2Q8WYA1 636 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
SPG7-209ENST00000564047 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 C8orf48Q96LL4 319 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 KLHL5Q96PQ7 755 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 C11orf70Q9BRQ4 267 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 PACSIN1Q9BY11 444 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 RHOBTB2Q9BYZ6 727 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 C11orf16Q9NQ32 467 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
SPG7-209ENST00000564047 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 BTNL10A8MVZ5 291 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 HHLA1C9JL84 531 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 TRIM66O15016 1216 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 C1RP00736 705 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 ADH1AP07327 375 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 HAPLN1P10915 354 aaPredicted RBP13.6□□□□□ -0.23
SPG7-209ENST00000564047 ABCB4P21439 1286 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 GRIK1P39086 918 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 TUFMP49411 452 aaKnown RBP13.6□□□□□ -0.23
SPG7-209ENST00000564047 RGS7P49802 495 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 CDR1P51861 262 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 GSCP56915 257 aaPredicted RBP13.6□□□□□ -0.23
SPG7-209ENST00000564047 ADCY1Q08828 1119 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 DUSP4Q13115 394 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 PLPP4Q5VZY2 271 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
SPG7-209ENST00000564047 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 HLA-CQ95604 372 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 ZNF653Q96CK0 615 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 TSGA10Q9BZW7 698 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 SYNCQ9H7C4 482 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 LRRC4Q9HBW1 653 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
SPG7-209ENST00000564047 ST7Q9NRC1 585 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 TMEM30AQ9NV96 361 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
SPG7-209ENST00000564047 A0A0A6YYK5 440 aaPredicted RBP13.59□□□□□ -0.23
SPG7-209ENST00000564047 FAM170AA1A519 330 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 HIDE1A8MVS5 230 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 E5RJQ4 531 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 F8VP50 259 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 KRT86O43790 486 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 ERBB2P04626 1255 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 CYP1A2P05177 515 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 RRM1P23921 792 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 KLRC2P26717 231 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 IRS1P35568 1242 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
SPG7-209ENST00000564047 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
SPG7-209ENST00000564047 TCEAL1Q15170 157 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 MGAT5BQ3V5L5 792 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 RAB41Q5JT25 222 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 LILRA6Q6PI73 481 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 REXO1L1PQ8IX06 675 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
SPG7-209ENST00000564047 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 TRMT1Q9NXH9 659 aaKnown RBP13.59□□□□□ -0.23
SPG7-209ENST00000564047 CNOT8Q9UFF9 292 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms