RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CFHR1Q03591 330 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 MCL1Q07820 350 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 DDR2Q16832 855 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
RNF40-205ENST00000563909 DAW1Q8N136 415 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 AK8Q96MA6 479 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 FCRL3Q96P31 734 aaPredicted RBP17.07■□□□□ 0.32
RNF40-205ENST00000563909 ZDHHC5Q9C0B5 715 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 SRPRBQ9Y5M8 271 aaKnown RBP17.07■□□□□ 0.32
RNF40-205ENST00000563909 HELZP42694 1942 aaKnown RBP17.06■□□□□ 0.32
RNF40-205ENST00000563909 CYB561D2O14569 222 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 NOL4O94818 638 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 DKK1O94907 266 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 HDCP19113 662 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 GRIA2P42262 883 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 KCNB1Q14721 858 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 SYCP2LQ5T4T6 812 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 SPATA1Q5VX52 437 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
RNF40-205ENST00000563909 TRMT2BQ96GJ1 504 aaKnown RBP17.06■□□□□ 0.32
RNF40-205ENST00000563909 HAPLN2Q9GZV7 340 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 CLMPQ9H6B4 373 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 IL21RQ9HBE5 538 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 TMLHEQ9NVH6 421 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 CYP8B1Q9UNU6 501 aa17.06■□□□□ 0.32
RNF40-205ENST00000563909 GOLGA4Q13439 2230 aaKnown RBP17.06■□□□□ 0.32
RNF40-205ENST00000563909 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 E9PMD0 336 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 MAOBP27338 520 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 KDSRQ06136 332 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 WSCD1Q658N2 575 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 LRRC69Q6ZNQ3 347 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 ADGRG2Q8IZP9 1017 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 BAHD1Q8TBE0 780 aaPredicted RBP17.05■□□□□ 0.32
RNF40-205ENST00000563909 RHBDD1Q8TEB9 315 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
RNF40-205ENST00000563909 MYRFLQ96LU7 910 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 CDC6Q99741 560 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
RNF40-205ENST00000563909 SCAND2PQ9GZW5 306 aaPredicted RBP17.05■□□□□ 0.32
RNF40-205ENST00000563909 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
RNF40-205ENST00000563909 RCOR1Q9UKL0 485 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 DNM3Q9UQ16 869 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 TSC2P49815 1807 aa17.05■□□□□ 0.32
RNF40-205ENST00000563909 CAPN8A6NHC0 703 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 SFI1A8K8P3 1242 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 PIRO00625 290 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 ZBTB24O43167 697 aaPredicted RBP17.04■□□□□ 0.32
RNF40-205ENST00000563909 SLC26A4O43511 780 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 NDUFS2O75306 463 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 ZNF217O75362 1048 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 TCF3P15923 654 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 EIF2S3P41091 472 aaKnown RBP17.04■□□□□ 0.32
RNF40-205ENST00000563909 EIF2DP41214 584 aaKnown RBP17.04■□□□□ 0.32
RNF40-205ENST00000563909 RPL10AP62906 217 aaKnown RBP17.04■□□□□ 0.32
RNF40-205ENST00000563909 ZXDBP98169 803 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 DHCR24Q15392 516 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 ENOX2Q16206 610 aaKnown RBP17.04■□□□□ 0.32
RNF40-205ENST00000563909 ZPBP2Q6X784 338 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 C12orf40Q86WS4 652 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 GAREM1Q9H706 876 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 C17orf75Q9HAS0 396 aa17.04■□□□□ 0.32
RNF40-205ENST00000563909 LEFTY2O00292 366 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 HLA-EP13747 358 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 CYP2F1P24903 491 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 UBA7P41226 1012 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 MAPK7Q13164 816 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 NFE2Q16621 373 aaPredicted RBP17.03■□□□□ 0.32
RNF40-205ENST00000563909 CCDC157Q569K6 752 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 WDR45BQ5MNZ6 344 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 JADE1Q6IE81 842 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 RINT1Q6NUQ1 792 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 TSPAN18Q96SJ8 248 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 NTPCRQ9BSD7 190 aaKnown RBP17.03■□□□□ 0.32
RNF40-205ENST00000563909 RUSC1Q9BVN2 902 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 TM7SF3Q9NS93 570 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 ANK1P16157 1881 aa17.03■□□□□ 0.32
RNF40-205ENST00000563909 ANO9A1A5B4 782 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 TBC1D3BA6NDS4 549 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 SCAMP3O14828 347 aaKnown RBP17.02■□□□□ 0.32
RNF40-205ENST00000563909 CUTAO60888 179 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 CILPO75339 1184 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 ZNF883P0CG24 379 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 HOXB2P14652 356 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 CDC25AP30304 524 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 WASP42768 502 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 TSPY1Q01534 308 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 KCNC4Q03721 635 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms