RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 SSTR1P30872 391 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 MAMLD1Q13495 774 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SLC45A4Q5BKX6 768 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 MPZL3Q6UWV2 235 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 ARMCX2Q7L311 632 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 HIPK4Q8NE63 616 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 FAM81AQ8TBF8 368 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SYT11Q9BT88 431 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 AP5M1Q9H0R1 490 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 VPS11Q9H270 941 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 LNPEPQ9UIQ6 1025 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 KIAA1551Q9HCM1 1747 aa10.9□□□□□ -0.67
RNF40-204ENST00000563683 IRS2Q9Y4H2 1338 aa10.9□□□□□ -0.67
RNF40-204ENST00000563683 ASB14A6NK59 587 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 MAP3K7O43318 606 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 HAUS5O94927 633 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 EGFRP00533 1210 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 NCF2P19878 526 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 FOXN2P32314 431 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 NOVP48745 357 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 TAS2R40P59535 323 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ZBTB41Q5SVQ8 909 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 OR52E8Q6IFG1 317 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 METTL7BQ6UX53 244 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 RGS9BPQ6ZS82 235 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ACOT1Q86TX2 421 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 NUDCD3Q8IVD9 361 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 FBXO36Q8NEA4 188 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 FAM136AQ96C01 138 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 WNK4Q96J92 1243 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 PIDD1Q9HB75 910 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 DMAP1Q9NPF5 467 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 DDNO94850 711 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 STAG3L1P0CL83 205 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 CA8P35219 290 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 CACNA2D1P54289 1103 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 PTK7Q13308 1070 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 GSTA3Q16772 222 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 DSTYKQ6XUX3 929 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 CRLF3Q8IUI8 442 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 WDR49Q8IV35 697 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 PPIL6Q8IXY8 311 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 EPAS1Q99814 870 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 AVENQ9NQS1 362 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 PIN4Q9Y237 131 aaKnown RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 R3HDM2Q9Y2K5 976 aaKnown RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 GM2AP17900 193 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ZNF200P98182 395 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 SLC34A1Q06495 639 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 MAP7D1Q3KQU3 841 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 C4orf50Q6ZRC1 276 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 TRIM42Q8IWZ5 723 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 SCG3Q8WXD2 468 aaKnown RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 COPS5Q92905 334 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 TLE6Q9H808 572 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 RSAD1Q9HA92 442 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 CCDC78A2IDD5 438 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 PLA2G6O60733 806 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 LYPLA2O95372 231 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 GPD1P21695 349 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 GARSP41250 739 aaKnown RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 SLC18A1P54219 525 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 MOGSQ13724 837 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 NFIL3Q16649 462 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 KIZQ2M2Z5 673 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 ATG16L1Q676U5 607 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 RWDD4Q6NW29 188 aaKnown RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 RHBDF2Q6PJF5 856 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 FAM43BQ6ZT52 329 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 PID1Q7Z2X4 250 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
RNF40-204ENST00000563683 FOXP3Q9BZS1 431 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
RNF40-204ENST00000563683 E2F8A0AVK6 867 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 EDF1O60869 148 aaKnown RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 MYL3P08590 195 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 RARBP10826 455 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 CHRNB2P17787 502 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 RFC1P35251 1148 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 PTK6Q13882 451 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 RCN1Q15293 331 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 TAF1BQ53T94 588 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 RASIP1Q5U651 963 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 FASTKD5Q7L8L6 764 aaKnown RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 C12orf56Q8IXR9 622 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 DNERQ8NFT8 737 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 PPP1R13LQ8WUF5 828 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 MFSD14AQ96MC6 490 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 FIS1Q9Y3D6 152 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 NHSL1Q5SYE7 1610 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 MTA2O94776 668 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms