RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SLC8B1Q6J4K2 584 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 KIAA1841Q6NSI8 718 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 AUTS2Q8WXX7 1259 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 FUBP3Q96I24 572 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMG1-208ENST00000563448 CLSTN3Q9BQT9 956 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 TLR10Q9BXR5 811 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
SMG1-208ENST00000563448 PCDHB5Q9Y5E4 795 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 ALG6Q9Y672 507 aa10.7□□□□□ -0.7
SMG1-208ENST00000563448 F8VP50 259 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 OR1D2P34982 312 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 TKTL1P51854 596 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ROR1Q01973 937 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 TAP1Q03518 808 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 KRT17Q04695 432 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ADCY1Q08828 1119 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ADIGQ0VDE8 80 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 PAPD7Q5XG87 772 aaKnown RBP10.69□□□□□ -0.7
SMG1-208ENST00000563448 TRNP1Q6NT89 227 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 DCUN1D2Q6PH85 259 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 SPRED2Q7Z698 418 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 TTC9BQ8N6N2 239 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 EMC1Q8N766 993 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ATAD1Q8NBU5 361 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 NDRG1Q92597 394 aaKnown RBP10.69□□□□□ -0.7
SMG1-208ENST00000563448 GDF15Q99988 308 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 ZBP1Q9H171 429 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 CRISPLD1Q9H336 500 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 LRRC4Q9HBW1 653 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 TMEM59LQ9UK28 342 aa10.69□□□□□ -0.7
SMG1-208ENST00000563448 MYO1FO00160 1098 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 LILRB3O75022 631 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 GRAP2O75791 330 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 URODP06132 367 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 COMTP21964 271 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 CTNNB1P35222 781 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 GRIK1P39086 918 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 GPR15P49685 360 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 AMPD2Q01433 879 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 SMARCB1Q12824 385 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 TAF5Q15542 800 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 PEX26Q7Z412 305 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 SCN4BQ8IWT1 228 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 SPPL2BQ8TCT7 592 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 C17orf80Q9BSJ5 609 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 AMFRQ9UKV5 643 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 TNFRSF10BO14763 440 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 PROSCO94903 275 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 CTSAP10619 480 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 DNAJB2P25686 324 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 SCNN1AP37088 669 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 MAGEA11P43364 429 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 RNASE9P60153 205 aaKnown RBP10.68□□□□□ -0.7
SMG1-208ENST00000563448 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
SMG1-208ENST00000563448 DAB2IPQ5VWQ8 1189 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 VSTM1Q6UX27 236 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
SMG1-208ENST00000563448 HES6Q96HZ4 224 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 C8orf48Q96LL4 319 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 ULBP1Q9BZM6 244 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 UBE2OQ9C0C9 1292 aaKnown RBP10.68□□□□□ -0.7
SMG1-208ENST00000563448 PNPLA8Q9NP80 782 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 STK39Q9UEW8 545 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 IP6K2Q9UHH9 426 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 SLC27A5Q9Y2P5 690 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 RWDD3Q9Y3V2 267 aa10.68□□□□□ -0.7
SMG1-208ENST00000563448 CEP290O15078 2479 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 TRIM66O15016 1216 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DDX3YO15523 660 aaKnown RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 URI1O94763 535 aaPredicted RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 ABLIM3O94929 683 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 CA3P07451 260 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 HAPLN1P10915 354 aaPredicted RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 FLT3P36888 993 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DAOAP59103 153 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DDR2Q16832 855 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SDHAF4Q5VUM1 108 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SLC26A9Q7LBE3 791 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 GPR65Q8IYL9 337 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SIX6OS1Q8N1H7 587 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 FNIP1Q8TF40 1166 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 CD101Q93033 1021 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 PLVAPQ9BX97 442 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 ALG13Q9NP73 1137 aaKnown RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 MRPL17Q9NRX2 175 aaKnown RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 C2CD4BA6NLJ0 364 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 C5orf67F2Z3F1 127 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 H0YGN5 161 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SRGAP2O75044 1071 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SOAT2O75908 522 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 FBXO21O94952 628 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SEC24AO95486 1093 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 USP17L7P0C7H9 530 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 GPD1P21695 349 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DNAJB1P25685 340 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms