RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NBNO60934 754 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 B3GAT3O94766 335 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 CYP11A1P05108 521 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 KRT3P12035 628 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 TYMPP19971 482 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 CTCFP49711 727 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 DNA2P51530 1060 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 PSMC1P62191 440 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 DSC1Q08554 894 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 ORC1Q13415 861 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 ELF2Q15723 593 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 DBF4BQ8NFT6 615 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 CD101Q93033 1021 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 MCRS1Q96EZ8 462 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 SUSD3Q96L08 255 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 RNPC3Q96LT9 517 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 MCEEQ96PE7 176 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 HNRNPABQ99729 332 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 ST7Q9NRC1 585 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 MTUS1Q9ULD2 1270 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 LTBP2Q14767 1821 aa10.21□□□□□ -0.78
UBFD1-202ENST00000563366 FNDC1Q4ZHG4 1894 aaPredicted RBP10.21□□□□□ -0.78
UBFD1-202ENST00000563366 TTC3P53804 2025 aa10.21□□□□□ -0.78
UBFD1-202ENST00000563366 TCRBV5S1A1TA0A578 114 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ENPP3O14638 875 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 XPO1O14980 1071 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 SART1O43290 800 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 EFCAB14O75071 495 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ERLIN1O75477 346 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 RNF8O76064 485 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 HSPA8P11142 646 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PTPN1P18031 435 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 GDF10P55107 478 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PRR20EP86478 221 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PRR20CP86479 221 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PRR20DP86480 221 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PRR20BP86481 221 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PRR20AP86496 221 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 FAAP100Q0VG06 881 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 HADHQ16836 314 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PKDCCQ504Y2 493 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ODF2Q5BJF6 829 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 FAM102AQ5T9C2 384 aaPredicted RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 WSCD1Q658N2 575 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 C8orf74Q6P047 294 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 CNKSR3Q6P9H4 555 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ARCQ7LC44 396 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 POLNQ7Z5Q5 900 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM110Q86TL2 294 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 XYLT1Q86Y38 959 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 NPAS4Q8IUM7 802 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 C12orf29Q8N999 325 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PATJQ8NI35 1801 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 SLC35F5Q8WV83 523 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ANKRD7Q92527 254 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 RBM41Q96IZ5 413 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 HSFY1Q96LI6 401 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 RUNDC3BQ96NL0 473 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 CPXM1Q96SM3 734 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 HINFPQ9BQA5 517 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 SYT15Q9BQS2 421 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ACBD6Q9BR61 282 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 OSBPL7Q9BZF2 842 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 C11orf49Q9H6J7 331 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF358Q9NW07 568 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 MIOSQ9NXC5 875 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 TOR4AQ9NXH8 423 aa10.2□□□□□ -0.78
UBFD1-202ENST00000563366 DDX56Q9NY93 547 aaKnown RBP10.2□□□□□ -0.78
UBFD1-202ENST00000563366 PTPRDP23468 1912 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 CCDC151A5D8V7 595 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 KRIT1O00522 736 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 ERBB2P04626 1255 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 KRT7P08729 469 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 CLTBP09497 229 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 PDGFRBP09619 1106 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 FAM200BP0CF97 657 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 FGFR1P11362 822 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 NPR3P17342 541 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 IBSPP21815 317 aaPredicted RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 LMO2P25791 158 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 PLA2G4AP47712 749 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 PEX5P50542 639 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TSPY1Q01534 308 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TLE2Q04725 743 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 ELAVL2Q12926 359 aaKnown RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 IKBKEQ14164 716 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 LONRF2Q1L5Z9 754 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TRIM60Q495X7 471 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 MAP9Q49MG5 647 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 C2CD6Q53TS8 623 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms