RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 NCCRP1Q6ZVX7 275 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 TMEM200AQ86VY9 491 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CNNM3Q8NE01 707 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 OR9A1PQ8NGU1 263 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SPPL3Q8TCT6 385 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NCSTNQ92542 709 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EFHD2Q96C19 240 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 PPP1R14BQ96C90 147 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 IFT74Q96LB3 600 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MAGEB10Q96LZ2 347 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 SLC9A7Q96T83 725 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EIF3CQ99613 913 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ELP3Q9H9T3 547 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 GDAP2Q9NXN4 497 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 IGSF9Q9P2J2 1179 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TLK1Q9UKI8 766 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RCOR1Q9UKL0 485 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ZMYND8Q9ULU4 1186 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 KLHL20Q9Y2M5 609 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 LRRC9Q6ZRR7 1453 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MED14O60244 1454 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 OR6C65A6NJZ3 312 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TTC34A8MYJ7 566 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PSMD9O00233 223 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TLL1O43897 1013 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EXOC3O60645 756 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 GAS7O60861 476 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NIPSNAP2O75323 286 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 URODP06132 367 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 BMP6P22004 513 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ACAT1P24752 427 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 GUCY1A2P33402 732 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ETV3P41162 512 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 HTR2BP41595 481 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CDK8P49336 464 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CEBPAP49715 358 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 CCR3P51677 355 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SLC8A3P57103 927 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ZNF445P59923 1031 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PMP22Q01453 160 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PTPN11Q06124 597 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 GALNT2Q10471 571 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 KCNAB2Q13303 367 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TRA2AQ13595 282 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMG1-207ENST00000563235 SLC12A1Q13621 1099 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TUBA3CQ13748 450 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SMU1Q2TAY7 513 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SLC39A12Q504Y0 691 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 GLE1Q53GS7 698 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 C4orf48Q5BLP8 95 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PACS2Q86VP3 889 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PSTKQ8IV42 348 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 CNTN4Q8IWV2 1026 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TAGAPQ8N103 731 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 IGSF22Q8N9C0 903 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 OR8K3Q8NH51 312 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 URGCPQ8TCY9 931 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 BRI3BPQ8WY22 251 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 WASF1Q92558 559 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CNKSR1Q969H4 720 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RNF125Q96EQ8 232 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CYFIP2Q96F07 1278 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 APIPQ96GX9 242 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CTAGE1Q96RT6 745 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 USB1Q9BQ65 265 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 HAUS4Q9H6D7 363 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TASP1Q9H6P5 420 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 DDX4Q9NQI0 724 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 NRBP2Q9NSY0 501 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SUCLA2Q9P2R7 463 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 MAD2L2Q9UI95 211 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MBD1Q9UIS9 605 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 POMT1Q9Y6A1 747 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 IRS2Q9Y4H2 1338 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 XKRY2A2RUG3 117 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 GSAPA4D1B5 854 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 HMX3A6NHT5 357 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 VILLO15195 856 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 TGM5O43548 720 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 GLI1P08151 1106 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 CCNYL3P0C7X3 344 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 NCF1P14598 390 aaPredicted RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 CHRM3P20309 590 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 GALP22466 123 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 MCM3P25205 808 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 GCH1P30793 250 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 ATXN3P54252 364 aaPredicted RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 UBE2HP62256 183 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 NOP14P78316 857 aaKnown RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 KIF23Q02241 960 aaPredicted RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 DSC2Q02487 901 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 NNTQ13423 1086 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 SQLEQ14534 574 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 POU4F3Q15319 338 aa5.02□□□□□ -1.61
SMG1-207ENST00000563235 TARBP2Q15633 366 aaKnown RBP5.02□□□□□ -1.61
SMG1-207ENST00000563235 RTN1Q16799 776 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms