RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CFAP57Q96MR6 1250 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ARGLU1Q9NWB6 273 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ASNSD1Q9NWL6 643 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 PCDH10Q9P2E7 1040 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 TRIM43BA6NCK2 446 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 PI4K2BG5E9Z4 385 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ALDH2P05091 517 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 TUBBP07437 444 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 MIPP30301 263 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 SLC11A1P49279 550 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 NDUFV1P49821 464 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 YWHAHQ04917 246 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ADCY1Q08828 1119 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 ADIGQ0VDE8 80 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 IKBKEQ14164 716 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 SLC26A9Q7LBE3 791 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 RAPGEF5Q92565 580 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 TRIM43Q96BQ3 446 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-208ENST00000563220 STIM2Q9P246 746 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 AMACRQ9UHK6 382 aa18.94■□□□□ 0.62
COMMD4-208ENST00000563220 CCDC151A5D8V7 595 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 DPYSL4O14531 572 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 UPP2O95045 317 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 RALAP11233 206 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 SCNN1AP37088 669 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 BCAR1P56945 870 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 CCDC50Q8IVM0 306 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 RCOR2Q8IZ40 523 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 HEMGNQ9BXL5 484 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 ZWILCHQ9H900 591 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 MARCH5Q9NX47 278 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 PCSK1NQ9UHG2 260 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 ADAM28Q9UKQ2 775 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 TANC1Q9C0D5 1861 aa18.93■□□□□ 0.62
COMMD4-208ENST00000563220 GOLGA6L10A0A0M3HER8 536 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 ZSCAN5CA6NGD5 496 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 HHLA1C9JL84 531 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 TRAPPC3O43617 180 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 RNF8O76064 485 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 SEC31AO94979 1220 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 OAZ2O95190 189 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 GALTP07902 379 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 BDNFP23560 247 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 KCNT1Q5JUK3 1230 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 MFSD7Q6UXD7 560 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 CCNI2Q6ZMN8 369 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 POLNQ7Z5Q5 900 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 NECAB2Q7Z6G3 386 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 SMARCD1Q96GM5 515 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 GPR62Q9BZJ7 368 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 SLITRK6Q9H5Y7 841 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 LRRC4Q9HBW1 653 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 CSNK1G1Q9HCP0 422 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 ZNF446Q9NWS9 450 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 FAN1Q9Y2M0 1017 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 MKI67P46013 3256 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 KIAA0100Q14667 2235 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 NT5C1B-RDH14C9J2C7 533 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 HEXIM1O94992 359 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 TRUB2O95900 331 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 KRT1P04264 644 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 PCK1P35558 622 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 PBX3P40426 434 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 MRPS5P82675 430 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 ATP11AP98196 1134 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 HADHQ16836 314 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 CDO1Q16878 200 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 SMTNL2Q2TAL5 461 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 ZFYVE27Q5T4F4 411 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 GPRIN1Q7Z2K8 1008 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 PEBP4Q96S96 227 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 COLEC11Q9BWP8 271 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 MRPL9Q9BYD2 267 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 OSBPL8Q9BZF1 889 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 DDX56Q9NY93 547 aaKnown RBP18.92■□□□□ 0.62
COMMD4-208ENST00000563220 USP18Q9UMW8 372 aa18.92■□□□□ 0.62
COMMD4-208ENST00000563220 TSC2P49815 1807 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 PHF2O75151 1096 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TIMP1P01033 207 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 OR4Q2P0C623 313 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 MYBL2P10244 700 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TFE3P19532 575 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 SDC4P31431 198 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 RFC2P35250 354 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TKTL1P51854 596 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TSPY1Q01534 308 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 KLF1Q13351 362 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 SMC1AQ14683 1233 aaKnown RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 CYP1B1Q16678 543 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TTC27Q6P3X3 843 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 CYP4V2Q6ZWL3 525 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 ARCQ7LC44 396 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 HNRNPLLQ8WVV9 542 aaKnown RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 MAGOHBQ96A72 148 aaKnown RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 TMEM106CQ9BVX2 250 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 ADAM33Q9BZ11 813 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms