RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SF3B3Q15393 1217 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 NPY5RQ15761 445 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 DGKKQ5KSL6 1271 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 KIAA0895LQ68EN5 471 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 FCRL6Q6DN72 434 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 HIBCHQ6NVY1 386 aaPredicted RBP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 GGT6Q6P531 493 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 CATSPERGQ6ZRH7 1159 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF280BQ86YH2 543 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 SLC44A3Q8N4M1 653 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 MYRIPQ8NFW9 859 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 LPIN2Q92539 896 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 FAM136AQ96C01 138 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 IQCDQ96DY2 449 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 PGBD1Q96JS3 809 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 Q96MF0 132 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 FAM83DQ9H4H8 585 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 CXorf36Q9H7Y0 433 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 CERS4Q9HA82 394 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 CASS4Q9NQ75 786 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 TESQ9UGI8 421 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 MID2Q9UJV3 735 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 PCDHGB2Q9Y5G2 931 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 CDY1Q9Y6F8 540 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 WDR27A2RRH5 827 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 APOL1O14791 398 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 CSF1RP07333 972 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 RARRES1P49788 294 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 CPT1AP50416 773 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 BTKQ06187 659 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 SLC29A2Q14542 456 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 PTPRRQ15256 657 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ELF2Q15723 593 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 TUBB8Q3ZCM7 444 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 HSP90AB4PQ58FF6 505 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 FAM209BQ5JX69 171 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF362Q5T0B9 420 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ARHGAP40Q5TG30 622 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 KLHDC7AQ5VTJ3 777 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 LRCH2Q5VUJ6 765 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ZKSCAN2Q63HK3 967 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 RGS7BPQ6MZT1 257 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 Q6ZNX1 250 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 RNF44Q7L0R7 432 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 KRT28Q7Z3Y7 464 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 DTX2Q86UW9 622 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 SLC15A3Q8IY34 581 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 VGLL2Q8N8G2 317 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 BOLLQ8N9W6 283 aaKnown RBP3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 B3GALNT2Q8NCR0 500 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 MYCBPAPQ8TBZ2 947 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 BPIFB1Q8TDL5 484 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 AIFM2Q9BRQ8 373 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ACTRT3Q9BYD9 372 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 TPSD1Q9BZJ3 242 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 TRIM5Q9C035 493 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 PRDM16Q9HAZ2 1276 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 DKK4Q9UBT3 224 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF212Q9UDV6 495 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 TLK1Q9UKI8 766 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 ITGB1BP2Q9UKP3 347 aa3.89□□□□□ -1.79
SHCBP1-202ENST00000563219 H7C4K7 107 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 hCG_1984214I3L0E3 225 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 YY2O15391 372 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 MPPED1O15442 326 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 RRP9O43818 475 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 WDHD1O75717 1129 aaPredicted RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 CHKAP35790 457 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 FOLR3P41439 243 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PTDSS1P48651 473 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PDE6CP51160 858 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 MAPK10P53779 464 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 SIM1P81133 766 aaPredicted RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PMS2P11Q13670 270 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF750Q32MQ0 723 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 NBPF8Q3BBV2 869 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 TEDDM1Q5T9Z0 273 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PLAG1Q6DJT9 500 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 BEND5Q7L4P6 421 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 MYLK4Q86YV6 388 aaPredicted RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 FANCBQ8NB91 859 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF384Q8TF68 577 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PPP2R3CQ969Q6 453 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 SCLT1Q96NL6 688 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 GDF15Q99988 308 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 DUSP26Q9BV47 211 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 ALG8Q9BVK2 526 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 EIF2AQ9BY44 585 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 KLC4Q9NSK0 619 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 GJB4Q9NTQ9 266 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 LUZP4Q9P127 313 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 SERTAD3Q9UJW9 196 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 HDAC9Q9UKV0 1011 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PNMA2Q9UL42 364 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 TBC1D30Q9Y2I9 924 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 LRCH1Q9Y2L9 728 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 MRPS17Q9Y2R5 130 aaKnown RBP3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 PCDHGB3Q9Y5G1 929 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms