RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 ATP2C2O75185 946 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 TACC1O75410 805 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 KAT7O95251 611 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 BCKDHBP21953 392 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 LMO2P25791 158 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 USP46P62068 366 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 RESTQ13127 1097 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 TRIM61Q5EBN2 209 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 SLC23A3Q6PIS1 610 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 CCDC65Q8IXS2 484 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 TXNDC5Q8NBS9 432 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 CEP76Q8TAP6 659 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 OVCA2Q8WZ82 227 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 MMS19Q96T76 1030 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 DUSP9Q99956 384 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 ELOVL4Q9GZR5 314 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 PCIF1Q9H4Z3 704 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 CPQQ9Y646 472 aa16.79■□□□□ 0.28
HERPUD1-205ENST00000562914 E2F8A0AVK6 867 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 PATE3B3GLJ2 98 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 HCRTO43612 131 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 KLF8O95600 359 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 ADH5P11766 374 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 RDXP35241 583 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 STAT6P42226 847 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 KIR2DL1P43626 348 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 PEAR1Q5VY43 1037 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 TTC30AQ86WT1 665 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 ALLCQ8N6M5 410 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 RNF38Q9H0F5 515 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 SNX25Q9H3E2 840 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 LAMA1P25391 3075 aa16.78■□□□□ 0.28
HERPUD1-205ENST00000562914 FAM208BQ5VWN6 2430 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 THADAQ6YHU6 1953 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 F8VP50 259 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 H0Y626 953 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 AP5Z1O43299 807 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 RTN3O95197 1032 aaPredicted RBP16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 TRIM16O95361 564 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 GAD2Q05329 585 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 TAF10Q12962 218 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 UAP1L1Q3KQV9 507 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 LYSMD4Q5XG99 296 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 SLC36A4Q6YBV0 504 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 OR5B17Q8NGF7 314 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 GATA6Q92908 595 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 FNBP1Q96RU3 617 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 SCNM1Q9BWG6 230 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 CFAP97Q9P2B7 532 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 NEUROG3Q9Y4Z2 214 aa16.77■□□□□ 0.28
HERPUD1-205ENST00000562914 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 SGK1O00141 431 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 ABL1P00519 1130 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 MBL2P11226 248 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 TIE1P35590 1138 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 TUBP50607 506 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 HNRNPDQ14103 355 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 MAP7D1Q3KQU3 841 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 MDH1BQ5I0G3 518 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 SCARA3Q6AZY7 606 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 NUP93Q8N1F7 819 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 DEFB124Q8NES8 71 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 HSPBP1Q9NZL4 362 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 ABCA7Q8IZY2 2146 aa16.76■□□□□ 0.27
HERPUD1-205ENST00000562914 ATP8B3O60423 1300 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 PTPRDP23468 1912 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 HOXC11O43248 304 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 CHRM1P11229 460 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 HNRNPLP14866 589 aaKnown RBP eCLIP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 ENGP17813 658 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 PTPN1P18031 435 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 YWHAQP27348 245 aa16.75■□□□□ 0.27
HERPUD1-205ENST00000562914 SLC6A11P48066 632 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms