RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RNF44Q7L0R7 432 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 SESTD1Q86VW0 696 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 ARHGEF25Q86VW2 580 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 KRT73Q86Y46 540 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 ZNF280BQ86YH2 543 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 SIRT6Q8N6T7 355 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 FAM98AQ8NCA5 519 aaKnown RBP3.56□□□□□ -1.84
CHD9-207ENST00000562806 PJA1Q8NG27 643 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 TIFAQ96CG3 184 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 IQCDQ96DY2 449 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 ZDHHC12Q96GR4 267 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 SNX22Q96L94 193 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 BBC3Q96PG8 261 aaPredicted RBP3.56□□□□□ -1.84
CHD9-207ENST00000562806 CHST8Q9H2A9 424 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 KLK15Q9H2R5 256 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 DUSP22Q9NRW4 184 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 DNMT3BQ9UBC3 853 aaKnown RBP3.56□□□□□ -1.84
CHD9-207ENST00000562806 ITGB1BP2Q9UKP3 347 aa3.56□□□□□ -1.84
CHD9-207ENST00000562806 MRPS17Q9Y2R5 130 aaKnown RBP3.56□□□□□ -1.84
CHD9-207ENST00000562806 CLCA1A8K7I4 914 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 CD3EAPO15446 510 aaKnown RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 RRP9O43818 475 aaKnown RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 PLIN1O60240 522 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 PIAS2O75928 621 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 FESP07332 822 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 BTF3P20290 206 aaKnown RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 ITPKBP27987 946 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 CYP2C18P33260 490 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 PTDSS1P48651 473 aaKnown RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 PICALMQ13492 652 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 GALEQ14376 348 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 NPY5RQ15761 445 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 PCID2Q5JVF3 399 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 ZNF362Q5T0B9 420 aaPredicted RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 CACHD1Q5VU97 1274 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 FCRLBQ6BAA4 426 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 DPY19L2P1Q6NXN4 242 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 Q6ZWC4 215 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 UNC13DQ70J99 1090 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 KRT28Q7Z3Y7 464 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 MAVSQ7Z434 540 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 CAND1Q86VP6 1230 aaKnown RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 SKAP1Q86WV1 359 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 RASAL3Q86YV0 1011 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 ATP11CQ8NB49 1132 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 FANCBQ8NB91 859 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 CCDC150Q8NCX0 1101 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 HASPINQ8TF76 798 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 XAGE5Q8WWM1 108 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 ZNF764Q96H86 408 aaPredicted RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 VN1R3Q9BXE9 311 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 FSD1LQ9BXM9 530 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 STARD7Q9NQZ5 370 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 DLL3Q9NYJ7 618 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 DKK3Q9UBP4 350 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 DKK4Q9UBT3 224 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 NKX1-2Q9UD57 310 aaPredicted RBP3.55□□□□□ -1.84
CHD9-207ENST00000562806 MID2Q9UJV3 735 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 ADAMTS5Q9UNA0 930 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 ST3GAL5Q9UNP4 418 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 PCDHGB6Q9Y5F9 930 aa3.55□□□□□ -1.84
CHD9-207ENST00000562806 TMEM233B4DJY2 109 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 TARM1B6A8C7 271 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 H0YIZ8 118 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 H7C1Q1 480 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 RAB27BO00194 218 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 MGST3O14880 152 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 TMPRSS11DO60235 418 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 SRGAP2O75044 1071 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 HNRNPCP07910 306 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD9-207ENST00000562806 UQCRC1P31930 480 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 GKP32189 559 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 TIRAPP58753 221 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 HOXA4Q00056 320 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 TIAL1Q01085 375 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD9-207ENST00000562806 SLC10A2Q12908 348 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 CLCA4Q14CN2 919 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 ST3GAL2Q16842 350 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 ZIK1Q3SY52 487 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 PLAG1Q6DJT9 500 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 ZDHHC24Q6UX98 284 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 CATSPERGQ6ZRH7 1159 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 COL23A1Q86Y22 540 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 SFTPA1Q8IWL2 248 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 DNAJB14Q8TBM8 379 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 BRI3BPQ8WY22 251 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 R3HDM4Q96D70 268 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 DAZAP1Q96EP5 407 aaKnown RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 VPS50Q96JG6 964 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 FAM227BQ96M60 508 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 C17orf80Q9BSJ5 609 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 SEMA4CQ9C0C4 833 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 GBA2Q9HCG7 927 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 ZBTB26Q9HCK0 441 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 HEYLQ9NQ87 328 aaPredicted RBP3.54□□□□□ -1.84
CHD9-207ENST00000562806 SNX15Q9NRS6 342 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 ASB6Q9NWX5 421 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 DNAJB11Q9UBS4 358 aa3.54□□□□□ -1.84
CHD9-207ENST00000562806 STEAP1Q9UHE8 339 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms