RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 EVLQ9UI08 416 aaPredicted RBP12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 CPQQ9Y646 472 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 USP24Q9UPU5 2620 aa12.61□□□□□ -0.39
CARMIL3-204ENST00000561354 THADAQ6YHU6 1953 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ANTXRLA6NF34 631 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 GIPC1O14908 333 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 KAT7O95251 611 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ADH1CP00326 375 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 CST3P01034 146 aaPredicted RBP12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 APODP05090 189 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 HNRNPLP14866 589 aaKnown RBP eCLIP12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 SYT1P21579 422 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 HOXD13P35453 343 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 P2RY2P41231 377 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 SLC6A11P48066 632 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 DHPSP49366 369 aaPredicted RBP12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 IRX4P78413 519 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 CEBPZQ03701 1054 aaKnown RBP12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ZNF252P-AS1Q0IIN9 211 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 EOGTQ5NDL2 527 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 SH3PXD2AQ5TCZ1 1133 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 HS2ST1Q7LGA3 356 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ALLCQ8N6M5 410 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 KBTBD4Q9NVX7 518 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
CARMIL3-204ENST00000561354 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 SGK1O00141 431 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 EIF3DO15371 548 aaKnown RBP eCLIP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 KLF8O95600 359 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 ABL1P00519 1130 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 GRIA2P42262 883 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 DPP6P42658 865 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 KIR2DL1P43626 348 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 SNRPFP62306 86 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 LMAN2Q12907 356 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PSMD6Q15008 389 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 UNQ6494/PRO21346Q6UXR6 183 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 LPCAT2Q7L5N7 544 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 EPM2AIP1Q7L775 607 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 NUP93Q8N1F7 819 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PDILTQ8N807 584 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 KDF1Q8NAX2 398 aaPredicted RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 OR6B3Q8NGW1 331 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 PIGKQ92643 395 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 SPACA7Q96KW9 195 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 USP28Q96RU2 1077 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 DUSP9Q99956 384 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 TRIM9Q9C026 710 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 ARHGEF4Q9NR80 690 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 CFAP97Q9P2B7 532 aa12.59□□□□□ -0.39
CARMIL3-204ENST00000561354 C1QTNF9BB2RNN3 333 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TGFB1I1O43294 461 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 C1QTNF9P0C862 333 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 DLATP10515 647 aaKnown RBP12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 ADH5P11766 374 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TNNI1P19237 187 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 YWHAQP27348 245 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TIE1P35590 1138 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 CACNA2D1P54289 1103 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TNNC1P63316 161 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 AMPD3Q01432 767 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 GAD2Q05329 585 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 MESP2Q0VG99 397 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 FOXC1Q12948 553 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 E2F4Q16254 413 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms