RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	TAF12	Q16514	161 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CFAP221	Q4G0U5	840 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	MDH1B	Q5I0G3	518 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	C1orf220	Q5T0J3	134 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	NAIF1	Q69YI7	327 aa	Predicted RBP	7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	TRIM68	Q6AZZ1	485 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304		Q6ZS52	159 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	HS2ST1	Q7LGA3	356 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	SCN4B	Q8IWT1	228 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	YAF2	Q8IY57	180 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CMTM8	Q8IZV2	173 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	FSIP1	Q8NA03	581 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	BPIFB1	Q8TDL5	484 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	PARD3B	Q8TEW8	1205 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	FAM3C	Q92520	227 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	TRMT2B	Q96GJ1	504 aa	Known RBP	7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	PCED1B	Q96HM7	432 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	GCNA	Q96QF7	691 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	FNBP1	Q96RU3	617 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	MMS19	Q96T76	1030 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CHRD	Q9H2X0	955 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	HPS4	Q9NQG7	708 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	OBP2A	Q9NY56	170 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	NXF1	Q9UBU9	619 aa	Known RBP	7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CDV3	Q9UKY7	258 aa	Known RBP	7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CDH9	Q9ULB4	789 aa		7.91	□□□□□ -1.14
ZEB1-223	ENST00000561304	CEP192	Q8TEP8	1941 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	C2orf78	A6NCI8	922 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	SPECC1L-ADORA2A	F8WAN1	911 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CLDN5	O00501	218 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	LAMTOR5	O43504	91 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	TACC1	O75410	805 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	STAU1	O95793	577 aa	Known RBP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	C4BPA	P04003	597 aa	Known RBP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	NR3C1	P04150	777 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CSH1	P0DML2	217 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CSH2	P0DML3	217 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ARSA	P15289	507 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MAGEA9	P43362	315 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MAGEA11	P43364	429 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	SYK	P43405	635 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CLDN10	P78369	228 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ZXDB	P98169	803 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	SATB1	Q01826	763 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CYP27A1	Q02318	531 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CSTF1	Q05048	431 aa	Known RBP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	DMWD	Q09019	674 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	DPYD	Q12882	1025 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	USP4	Q13107	963 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ORC1	Q13415	861 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	PON2	Q15165	354 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	WDR72	Q3MJ13	1102 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ARHGAP29	Q52LW3	1261 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	PKN3	Q6P5Z2	889 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	SCARA5	Q6ZMJ2	495 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	KRBA2	Q6ZNG9	492 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	DPH6	Q7L8W6	267 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ADSSL1	Q8N142	457 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MYCBPAP	Q8TBZ2	947 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CSGALNACT1	Q8TDX6	532 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	NELL1	Q92832	810 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	E2F7	Q96AV8	911 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MYRFL	Q96LU7	910 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CYP2S1	Q96SQ9	504 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	FAM83C	Q9BQN1	747 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	ZNF518B	Q9C0D4	1074 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	LMAN1L	Q9HAT1	526 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	GCNT4	Q9P109	453 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	CGN	Q9P2M7	1197 aa	Known RBP	7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	HMGXB4	Q9UGU5	601 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	FBXO4	Q9UKT5	387 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MAPK8IP1	Q9UQF2	711 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	NUP205	Q92621	2012 aa		7.9	□□□□□ -1.14
ZEB1-223	ENST00000561304	MYO18A	Q92614	2054 aa	Known RBP	7.9	□□□□□ -1.15
ZEB1-223	ENST00000561304	TNRC6B	Q9UPQ9	1833 aa	Known RBP	7.9	□□□□□ -1.15
ZEB1-223	ENST00000561304	EP300	Q09472	2414 aa	Predicted RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	PLXND1	Q9Y4D7	1925 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	PTPRZ1	P23471	2315 aa	Predicted RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304		A0A1W2PQ27	194 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304		A0A1W2PQ64	194 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304		A0A1W2PQD8	194 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304		F8VP50	259 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	MAN2B1	O00754	1011 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	CAPN5	O15484	640 aa	Predicted RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	LILRB5	O75023	590 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	RHOBTB3	O94955	611 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	LMNA	P02545	664 aa	Known RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	TRIM49	P0CI25	452 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	TRIM49C	P0CI26	452 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	DDX6	P26196	483 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	GNL1	P36915	607 aa	Predicted RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	AVPR1A	P37288	418 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	KPNA1	P52294	538 aa	Predicted RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	RPL10A	P62906	217 aa	Known RBP	7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	TNNC1	P63316	161 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	PSMD2	Q13200	908 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	BIRC3	Q13489	604 aa		7.89	□□□□□ -1.15
ZEB1-223	ENST00000561304	ZNF77	Q15935	545 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms