RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF132P52740 706 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
TPM1-230ENST00000561266 KRT31Q15323 416 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 ARHGAP15Q53QZ3 475 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 APTXQ7Z2E3 356 aaKnown RBP14.71□□□□□ -0.05
TPM1-230ENST00000561266 MFSD6LQ8IWD5 586 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 UBA3Q8TBC4 463 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 PBXIP1Q96AQ6 731 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 CEP295NLQ96MC4 621 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 GPR88Q9GZN0 384 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 TRPC7Q9HCX4 862 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 OSER1Q9NX31 292 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 GMIPQ9P107 970 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 UXTQ9UBK9 157 aaPredicted RBP14.71□□□□□ -0.05
TPM1-230ENST00000561266 CNTN6Q9UQ52 1028 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 F5P12259 2224 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 ATP8B3O60423 1300 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 GTPBP10A4D1E9 387 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 O00370 1275 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 PI15O43692 258 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 PNMA6AP0CW24 399 aaPredicted RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 CD19P15391 556 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 ZNF18P17022 549 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 BRD2P25440 801 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 GDI1P31150 447 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 KLK7P49862 253 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 GCNT1Q02742 428 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 CETN1Q12798 172 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 EXOC3L4Q17RC7 722 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 GOLGA7BQ2TAP0 167 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 PKDCCQ504Y2 493 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 CWF19L1Q69YN2 538 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 GBP6Q6ZN66 633 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 BMP8AQ7Z5Y6 402 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 FAM114A1Q8IWE2 563 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 DHX40Q8IX18 779 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 SIX5Q8N196 739 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 AOPEPQ8N6M6 819 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 RBBP8NLQ8NC74 664 aaPredicted RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 NDRG1Q92597 394 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 MRPS31Q92665 395 aaKnown RBP14.7□□□□□ -0.06
TPM1-230ENST00000561266 FBXO32Q969P5 355 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 GCNAQ96QF7 691 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 VPS16Q9H269 839 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 TSPAN16Q9UKR8 245 aa14.7□□□□□ -0.06
TPM1-230ENST00000561266 SYCE3A1L190 88 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 OAS1P00973 400 aaKnown RBP14.69□□□□□ -0.06
TPM1-230ENST00000561266 ZDHHC11BP0C7U3 371 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 VDRP11473 427 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 ATP1A3P13637 1013 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 PSMC3P17980 439 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 KIF11P52732 1056 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 MYL5Q02045 173 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 PDE4CQ08493 712 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 ARHGAP44Q17R89 818 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 SCD5Q86SK9 330 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 TTC39CQ8N584 583 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 ANKRD52Q8NB46 1076 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 WBP2Q969T9 261 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 TRMT61BQ9BVS5 477 aaKnown RBP14.69□□□□□ -0.06
TPM1-230ENST00000561266 FAM124BQ9H5Z6 455 aaPredicted RBP14.69□□□□□ -0.06
TPM1-230ENST00000561266 NMUR1Q9HB89 426 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 HEBP1Q9NRV9 189 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 WNT16Q9UBV4 365 aa14.69□□□□□ -0.06
TPM1-230ENST00000561266 OTOL1A6NHN0 477 aaPredicted RBP14.68□□□□□ -0.06
TPM1-230ENST00000561266 CYP26A1O43174 497 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
TPM1-230ENST00000561266 OLFM2O95897 454 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 ABL1P00519 1130 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 PAEPP09466 180 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 HDCP19113 662 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 CD72P21854 359 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 DDX6P26196 483 aaKnown RBP eCLIP14.68□□□□□ -0.06
TPM1-230ENST00000561266 EEF1GP26641 437 aaKnown RBP14.68□□□□□ -0.06
TPM1-230ENST00000561266 TNK2Q07912 1038 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 FCHO2Q0JRZ9 810 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 SLC44A4Q53GD3 710 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 BHLHA9Q7RTU4 235 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 PIGZQ86VD9 579 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 TTC8Q8TAM2 541 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 CCSER2Q9H7U1 834 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 TDP1Q9NUW8 608 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 APEX2Q9UBZ4 518 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 LIMA1Q9UHB6 759 aaKnown RBP14.68□□□□□ -0.06
TPM1-230ENST00000561266 DNAJC12Q9UKB3 198 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 FBXL21Q9UKT6 434 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 MTF2Q9Y483 593 aaPredicted RBP14.68□□□□□ -0.06
TPM1-230ENST00000561266 FHOD1Q9Y613 1164 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 USP3Q9Y6I4 520 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 WDFY4Q6ZS81 3184 aa14.68□□□□□ -0.06
TPM1-230ENST00000561266 MIA3Q5JRA6 1907 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 TRAV19A0A0A6YYK7 116 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 FOXN3O00409 490 aaPredicted RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 SCAMP3O14828 347 aaKnown RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 EPHB6O15197 1021 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 COCHO43405 550 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 TBX18O95935 607 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms